eLife Sciences's Projects
Single-molecule trajectory idealization using divisive segmentation and clustering (DISC)
A set of scripts for analyzing deep sequencing data for deep mutational scanning (DMS)
Snakemake pipeline to produce figures for "Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios"
analysis used in Doc2b eLife paper
Detection of Molecules plugin for ImageJ, Utrecht University
Generates a single figure that combines ConSurf, PSIPRED, DISOPRED and PFAM data.
These are the custom written scripts for Dooley and Blumberg, 2018, published in eLife
Code to analyze data from Cai et al., eLife 2020
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes
matlab code for microcolony droplets
Code for "The transcriptomic response of cells to a drug combination is more than the sum of the responses to the monotherapies"
This repository contains the raw data and the full R script for all the analyses in the following manuscript.
Dynamic Spectrotemporal Receptive Field Analysis