eLife Sciences's Projects
Supplementary code and URLs to data
Analysis of Hi-C in hybrid yeast and related ChIP-seq and RNA-seq data
Machine learning analysis of Hydra behavior
ICLIP analysis for MEG-3 and PGL-1
Bash, python, and R scripts used to analyze CLIP data.
Image segmentation and tracking software developed by Kueh lab
Supplementary Code for "Dynamics of the IFT Machinery at the Ciliary Tip," Chien et al. ELife 2017
An ImageJ plugin for fiber size measurement
This macro is aimed at basic data extraction/normalisation from FRAP datasets acquired using the Metamorph software
Web-based software for visualization of molecular maps in 2D and 3D
Official Geneset (OGS) for Ignelater luminosus, at least until I figure out a long term alternative
Image analysis and processing scripts
ImageJ macro for segmentation and quantification of presynaptic ribbon and postsynaptic density
MATLAB functions for processing 2photon calcium imaging data
Neural dynamics of perceptual inference and its reversal during imagery
Analyze topography of tumor-infiltrating immune cells in histological images (QuPath/Matlab)
Code and data for "Quantification of anti-parasite and anti-disease immunity to malaria as a function of age and exposure"
Inferelator_ng fork to handle single-cell RNA sequencing data
This is the code accompanying Insanally, et al eLife, 2019