elifesciences-publications Goto Github PK

ribotag_translational_efficiency

Estimation of translational efficiency from RiboTag IP RNA-seq data

ridge

Efficient python code for running ridge regression with cross validation

riekelab-package

Rieke Lab common Symphony package

rmars-comparing-connectivity-blueprints

rnadecay

rnascope-ihc-colocalization-in-imagej

An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.

rnaseq_analysis

rnaseq_pipeline

rnaseqquant

RNA-Seq quantification using a rescuing scheme that distributes ambiguously mapped reads based on uniquely mapped ones.

rodrigo-duplications

roibasedperkanalysis

Tools for ROI-based pERK analysis (cell count in ROI, mean fluorescence in ROI)

rpt-project

Code associated with the Review, Promotion and Tenure project

rrcs

RRCS (Residue-residue contact score)

rsvhouseholdmodel

Julia 0.6 code for running the RSV Household transmission model (see https://www.biorxiv.org/content/10.1101/569335v1.abstract for preprint).

rt_habit

rtp_co-adapt_model

rxivist

API providing access to papers and authors scraped from biorxiv.org

rxivist_web

Web application for Rxivist, the web application that makes it easier to find the most talked-about papers on bioRxiv.org

ryanodine_receptor_dispersion_during_heart_failure

Repository for the article "Ryanodine Receptor Dispersion Disrupts Ca2+ Release in Failing Cardiac Myocytes"

s1-kinematics

Code for S1 kinematics project

saenopy

Semi-affine Elastic Network Optimizer to calculate forces in collagen or other biopolymer networks.

sailor

CWL+Singularity implementation of an RNA editing workflow

saiz-et-al_2020

Data and code for the article by Saiz et al deposited in biorXiv

sam_spaghetti

samplin

sams_hpc_fmri

Data and Code from Trelle, Carr, Guerin et al. (2020) - eLife

sanders-et-al-2020-elife

sangermutantlibraryanalysis

Analyze a mutant library based on the results from Sanger sequencing some selected clones

sapphire

savic_crispr_hdr

Scripts for analyses in Savic et al 2018