eLife Sciences's Projects
Estimation of translational efficiency from RiboTag IP RNA-seq data
Efficient python code for running ridge regression with cross validation
Rieke Lab common Symphony package
An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.
RNA-Seq quantification using a rescuing scheme that distributes ambiguously mapped reads based on uniquely mapped ones.
Tools for ROI-based pERK analysis (cell count in ROI, mean fluorescence in ROI)
Code associated with the Review, Promotion and Tenure project
RRCS (Residue-residue contact score)
Julia 0.6 code for running the RSV Household transmission model (see https://www.biorxiv.org/content/10.1101/569335v1.abstract for preprint).
API providing access to papers and authors scraped from biorxiv.org
Web application for Rxivist, the web application that makes it easier to find the most talked-about papers on bioRxiv.org
Repository for the article "Ryanodine Receptor Dispersion Disrupts Ca2+ Release in Failing Cardiac Myocytes"
Code for S1 kinematics project
Semi-affine Elastic Network Optimizer to calculate forces in collagen or other biopolymer networks.
CWL+Singularity implementation of an RNA editing workflow
Data and code for the article by Saiz et al deposited in biorXiv
Data and Code from Trelle, Carr, Guerin et al. (2020) - eLife
Analyze a mutant library based on the results from Sanger sequencing some selected clones
Scripts for analyses in Savic et al 2018