eLife Sciences's Projects
Citation: Devine, C. A. (2019). Temporal_Uncertainty_DevineCA. Github.
code for the article "Temporal Chunking as a Mechanism for Unsupervised Learning of Task-Sets"
Code for the figures in the "Ten Simple Rules for Computational Modeling of Behavioral Data" paper.
Fitting and visualizing tensor decompositions in Python
Collection of small datasets needed for running nelpy's tests.
new description
Codes and figure data used for "Bright multicolor labeling of neuronal circuits with fluorescent proteins and chemical tags" by Sakaguchi et al 2018
code for performing texture analysis on grayscale images
Code to reproduce analysis and figures for 'Mapping heritability of obesity by cell types' (Timshel, bioRxiv 2020)
Scripts used for execution of TMS Neurofeedback experiment
Functional evaluation of transposable elements as enhancers in mouse embryonic and trophoblast stem cells
code to generate data and figures for "Topological Constraints In The Origin of Adaptive Specialization"
Repository for the cardiac model ToR-ORd
Scripts used to produce and analyse psychophysical data. These data describe how humans perceive frequency of vibration through touch.
Analysis software for single-molecule fluorescence resonance energy transfer (smFRET) data.
FIJI macros and python scripts to quantify and analyse RV and AAV tracings
A python based tool to help collect location data from video
Scripts to allow replication of the analysis from "Transmission dynamics and control of multidrug-resistant Klebsiella pneumoniae in neonates in a developing country"
Code for analyses in 2020 nCoV preprint, based on analyses from Gostic et al., eLife, 2015.
Comparison of the genes expressed in lower and upper first molar germs in DUHi and FVB
TIGS (Tumor Immunogenicity Score) project
Max Turner's Symphony package
Tutorials demonstrating specific features or patterns commonly used in nelpy.