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insectnavigationtoolkitmodelling

Modelling the insect navigation toolkit

instrument-control

scripts for controlling equipments/instruments

integrate

Creating a heterogeneous network for drug repurposing

intensityatminusend

Source code for Hueschen, Kenny, Xu, Dumont, "NuMA Recruits Dynein Activity to Microtubule Minus-Ends at Mitosis," 2017.

inter_intra_variation

Analyses for investigation of large scale organisation of stellate cell properties

interproscan_to_enzyme_go

inverse-effectiveness-paper

This is all code necessary to replicate the calcium imaging analysis for our Elife paper, "A Cellular Mechanism for Inverse Effectiveness in Multisensory Integration"

invivo

Post-hoc In vivo data analysis, VEP & SU

irscellsimulation

Simulation of a specific type of retinal ganglion cell under saccade-like image transitions. Accompanying a manuscript by Krishnamoorthy, Weick, and Gollisch.

isecc

Icosahedral Subparticle Extraction & Correlated Classification

ishii_wohl_desouza_asahina_2019

Analysis package for the paper Ishii*, Wohl*, DeSouza, Asahina (2019) *co first authors

itcacquire

ITCAcquire Data Acquisition Program

iteem

Source code for the Interaction and Trade-off based Eco-Evolutionary Model (ITEEM)

iterativerank

Light python libraries to implement the basic iterative rank network algorithm

itria

Analysis of roGFP & cell tracking tool

java

All my java code

je_burden_estimates

jganalyze

Jeff's data analysis routines

jointforces

A Python package to conduct 3D Traction Force Microscopy on multicellular aggregates (spheroids).

joji

jum

A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns

junction_mapper

Java desktop client software for analysing biological images of cell junctions

kakebeen-et-al-2020

katp_paper_2019

Data and code accompanying "Nucleotide inhibition of the pancreatic ATP-sensitive K+ channel explored with patch-clamp fluorometry".

katrinpreller

keinath_boundarytetheredmodel

kinecttracking

Library for converting kinect data to OpenSim readable format

kip2-spb-profile-manuscript

knkutils

MATLAB utility functions written by Kendrick Kay

knogler_etal_2019_elife

MATLAB source code for Purkinje cell spike extraction and summary analyses