eLife Sciences's Projects
R code for May, Rosander, Gottfried, Dennis, and Dus, submission 2019 https://doi.org/10.7554/eLife.54530
Model of olfactory network in locust mushroom body
Compute the overlap of md frames to an input structure
Task and analysis code for a project looking at the contributions of episodic memory to value-based decision-making
MDToolbox: A MATLAB/Octave toolbox for statistical analysis of molecular dynamics trajectories
Collection of measurement implementations built for cellular morphology studies.
Code for building mechanistic profiles of neurological diseases from grey matter volumetric information.
This code reads data into Matlab from Med-Associates wireless activity wheels, and plots actograms.
Analysis code for Bonaiuto, et al "Laminar-specific cortical dynamics in human visual and sensorimotor cortices"
library and scripts for data analysis and visualization for Engemann at et al. 2020
A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.
Differential impact of self and environmental antigens on the ontogeny and maintenance of CD4 + T cell memory
Looking into MERS-CoV dynamics through the structured coalescent lens
Metagenomics calibration R package
Accompanying code for Shapiro et al. 2019
Helps to write the material and methods section of a scientific article, by automatically generating a description of the imaging parameters.
MGC: multiscale graph correlation (pronounced "magic")
Analysis scripts accompanying the eLife publication "Synergistic action of metabotropic and ionotropic glutamate receptors in cerebellar molecular layer interneurons in vivo"
Analysis for McLaren, Willis, and Callahan (2019)
MATLAB analysis tools for symphony data
Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
microbeFDT-neo4j