eLife Sciences's Projects
Supplementary code for the manuscript: "Efficient Termination of Nuclear lncRNA Transcription Promotes Mitochondrial Genome Maintenance"
Source codes, source data files and figures for the paper "Dual-Regime Geometry for Embryonic Patterning"
R package to implement DunedinPoAm38 in Illumina EPIC and 450k array data
Code used in Belsky et al. 2020 eLife "Quantification of the pace of biological aging in humans through a blood test: The DunedinPoAm DNA methylation algorithm"
Economic choice behavioral data for paper entitled 'Medial orbitofrontal inactivation does not affect economic choice'
Code for growth phenotypes prediction in E. coli and manuscript figures generation
Summary tables, code, figures for Sinha et al. eLife 2020
EEG proxy from networks of point neurons
The code for analysis and model fitting used in the paper "Effects of dopamine on reinforcement learning and consolidation in Parkinson's disease".
Simulations code for Antonini et al
Comparative genomics tool for Eggerthella lenta and Coriobacteriia
Software for Reeson et al 2018 eLIFE
Matlab code from the ms Booker et al., 2020 eLife.
Clathrin coat controls vesicle acidification by blocking vacuolar ATPase activity. Zohreh Farsi1,5, Sindhuja Gowrisankaran2, Matija Krunic2, Burkhard Rammner3, Dietmar Riedel4, Andrew Woehler5, Carsten Mim6, Reinhard Jahn1, Ira Milosevic2
Scripts used for the analysis of dig-and-dive behavior published in Kim et al, eLife 2017
Shared data for manuscript "Integrated Externally and Internally Generated Task Predictions Jointly Guide Cognitive Control in Prefrontal Cortex"
MATLAB code for calculating equilibrium concentrations of molecular species in cis-activation models
contains python scripts (related to GC-MLI STP, firing analysis of photostimulation, minimal, sequential patch) used for final manuscript
Matlab scripts released with the 2018 eLife manuscript by Tastekin, Khandelwal et al. (Louis lab)
This repository partially includes scripts used in the analysis of data for the "Population-scale proteome variation in human induced pluripotent stem cells"
Code for figures in Bolding et al. 2020 (eLife)
Analysis and plotting scripts for behavioral experiments in Sullivan, Warren, and Doe 2019
Code Files to generate figures from article "origin and Role of CSF flow profile'
Analysis code for calcium imaging data from Jain, Murphy-Baum, et al. (2020) eLife.