Topic: cytometry Goto Github
Some thing interesting about cytometry
Some thing interesting about cytometry
cytometry,This repository contains general examples, code snippets and guidelines.
Organization: bodenmillergroup
Home Page: https://bodenmillergroup.github.io/bbsnippets
cytometry,Histology Topography Cytometry Analysis Toolbox (histoCAT) for Web.
Organization: bodenmillergroup
Home Page: https://bodenmillergroup.github.io/histocat-web
cytometry,A data-centric flow/mass cytometry automated analysis framework
User: burtonrj
Home Page: https://cytopy.readthedocs.io/en/latest/
cytometry,Integration of multi-batch cytometry datasets
User: casanova-lab
cytometry,Algorithms for the selection of fluorescent reporters.
Organization: cidarlab
Home Page: http://fpselection.org/
cytometry,Comparison of Dimensionality Reduction Techniques in CytoExploreR
User: dillonhammill
cytometry,A clustering algorithm that will perform clustering on each of a time-series of discrete datasets, and explicitly track the evolution of clusters over time.
User: ghar1821
cytometry,Temporal clustering and tracking algorithm which fuses on FlowSOM and ChronoClust, specifically designed for analysing temporal cytometry data
User: ghar1821
Home Page: https://ghar1821.github.io/TrackSOM/
cytometry,Tools for Imaging Flow Cytometry
User: gitdemont
cytometry,Data for Imaging Flow Cytometry
User: gitdemont
cytometry,Image Processing tools for Imaging Flow Cytometry
User: gitdemont
cytometry,An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry
User: gitdemont
cytometry,an interactive explorer for flow cytometry data
User: gszep
cytometry,An R package to apply Batch Normalization to cytometry
Organization: i-cyto
cytometry,A R package to apply Batch Normalization to cytometry
Organization: i-cyto
cytometry,R Script for reading CyTOF or flow cytometry data (FCS) and generating plots like Cytobank
User: jimbomahoney
cytometry,R script for summarising paramater / channel intensity from flow or mass cytometry data
User: jimbomahoney
cytometry,Plots log histograms of FCS files like CyTOF's PlotViewer program
User: jimbomahoney
cytometry,An R package for analyzing high-dimensional cytometry data using the tidyverse.
User: keyes-timothy
Home Page: https://keyes-timothy.github.io/tidytof/
cytometry,Cowfish: an Aquarium cytometry results analyzing package in Python
Organization: klavinslab
cytometry,Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Organization: lance-waller-lab
cytometry,Bringing Flow Cytometry into the realm of KNIME.
Organization: landysh
cytometry,Huge-scale, high-performance flow cytometry clustering in Julia
Organization: lcsb-biocore
Home Page: http://git.io/GigaSOM.jl
cytometry,Import script needed to build FluPRINT database from source :computer:
User: login-
Home Page: https://fluprint.com
cytometry,Pipeline for flow cytometry anlaysis
User: luglilab
cytometry,Autogating for gate 1 and gate 2 with U-Net.
User: maplebkl
cytometry,The equivalent circuit model for a parallel electrode impedance cytometer is analyzed together with Maxwell's theory of homogenization of mixtures. It deals with both a modeling single and double shell.
User: mastroalex
Home Page: https://alessandromastrofini.it/en/cytometer-circuit-equivalent/
cytometry,An R package for visualization and relational analysis of cell states, based on the Mapper algorithm from topological data analysis.
User: matei-ionita
cytometry,Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.
Organization: mics-lab
Home Page: https://mics-lab.github.io/scyan/
cytometry,online version please visit
Organization: mingchen-lab
Home Page: http://bis.zju.edu.cn/cytosee
cytometry,Image Mass Cytometry analysis pipeline
Organization: nf-core
Home Page: https://nf-co.re/imcyto
cytometry,HDStIM: High Dimensional Stimulation Immune Mapping
Organization: niaid
Home Page: https://niaid.github.io/HDStIM/
cytometry,PICAFlow: a complete R workflow dedicated to flow/mass cytometry data, from data pre-processing to deep and comprehensive analysis.
User: paulregnier
Home Page: https://paul-regnier.fr/tutoriel-picaflow/
cytometry,SuperCell for Cytometry data
Organization: phipsonlab
Home Page: https://phipsonlab.github.io/SuperCellCyto/
cytometry,HIPC Cytometry
Organization: rglab
Home Page: https://rglab.github.io/HIPCCyto/
cytometry,Counts index files and folders produced by the BD Influx
User: sangercytometry
cytometry,Rename your BD Influx workspaces to the same name found in the 'Name' tag of the workspace
User: sangercytometry
cytometry,R scripts to help with your flow cytometry analysis. Batch index export and overlays
User: sangercytometry
cytometry,Extracts the sort statistics from the XDP server
User: sangercytometry
cytometry,Open source static cytometry, initially targeting P. falciparum malaria
User: scivision
Home Page: https://www.scivision.co/open-source-cytometry/
cytometry,Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments
User: terkild
cytometry,Easily install and load packages from the tidyomcis ecosystem
Organization: tidyomics
Home Page: https://tidyomics.github.io/tidyomicsBlog/
cytometry,A Python library for reading and writing Flow Cytometry Standard (FCS) files
User: whitews
Home Page: https://flowio.readthedocs.io
cytometry,A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
User: whitews
Home Page: https://flowkit.readthedocs.io
cytometry,FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
User: whitews
Home Page: https://flowutils.readthedocs.io
cytometry,Shape-Out has been superseded by Shape-Out 2.
Organization: zellmechanik-dresden
Home Page: https://shapeout.readthedocs.io
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