Topic: mirna Goto Github
Some thing interesting about mirna
Some thing interesting about mirna
mirna,An attempt to help anyone interested in using Perl for Bioinformatics
User: biocoder
mirna,microRNA validation using Spark framework
Organization: bioinfouqam
mirna,miRNA-UTR approximate matching algorithms in R/Python/Bash
User: bohdan-khomtchouk
mirna,small rna-seq analysis package
User: dmnfarrell
mirna,miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis
User: eandresleon
mirna,Use this program can let user quickly combine the miRNA/Gene expression and clinical data. Speed up the data preprocessing step.
User: evan199893
mirna,This script implements a Selenium WebDriver to automate the access to miRDB - MicroRNA Target Prediction and Functional Study Database and search for microRNAs targets/seeds present in custom mRNA sequences.
User: gbnegrini
mirna,TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy
Organization: githbdx
Home Page: https://www.transforna.com
mirna,MLPMDA:用于预测miRNA-疾病关联的多层线性投影
User: greenary-john
mirna,BioSeq2vec: learning deep representation of biological sequences using LSTM Encoder-Decoder
User: haichengyi
mirna,miRNA subcellular localization
User: hsiaoyetgun
mirna,AmiR-P3 is an advanced ab initio plant miRNA prediction pipeline in Python, offering customizable prediction criteria and leveraging powerful computational techniques.
User: ilia-abolhasani
Home Page: https://hub.docker.com/r/micrornaproject/amir-p3
mirna,A command line version of the psRNATarget workflow that predicts potential miRNA target locations on a genome.
User: jtremblay
mirna,Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
User: junchaoshi
mirna,isomiR quantification and analysis pipeline
User: kevinniechen
Home Page: https://cgc.sbgenomics.com
mirna,OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.
User: kstawiski
Home Page: https://kstawiski.github.io/OmicSelector/
mirna,analyze isomiRs from seqbuster tool
User: lpantano
Home Page: http://lpantano.github.io/isomiRs/
mirna,small RNA analysis from NGS data
User: lpantano
Home Page: http://seqcluster.readthedocs.io
mirna,visualization of seqcluster output, try at:
User: lpantano
Home Page: http://lpantano.github.io/seqclusterViz/
mirna,BOVINE-circQTL is a code repository for the pipeline of circQTL identification and downstream analysis in bovine muscle tissue.
User: luffy563
mirna,Simple scripts to parallelize miRNA analysis with sRNAtoolbox performed for my Master thesis.
User: marromesc
mirna,NAnostring quality Control dasHbOard
User: mcanouil
Home Page: https://m.canouil.dev/NACHO/
mirna,command lines tool to annotate miRNAs with a standard mirna/isomir naming
Organization: mirtop
Home Page: https://mirtop.readthedocs.org
mirna,CmiRClustFinder v1.0: a tool for identification of CNV co-locolized miRNA, miRNA clusers and genes in TCGA cancer cohorts.
User: msls-bioinfo
mirna,Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
User: multitalk
Home Page: https://github.com/multitalk/awesome-cell-cell-communication
mirna,circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
Organization: nf-core
Home Page: https://nf-co.re/circrna
mirna,An open platform which provides information about miRNAs and genes from different popular databases
Organization: omics-datascience
Home Page: https://revistas.unlp.edu.ar/IDTS/article/view/12122
mirna,Precursor microRNA Identification Using Deep Convolutional Neural Networks
User: peace195
mirna,Discovering known and novel miRNAs from small RNA sequencing data
Organization: rajewsky-lab
mirna,CMTCN: A web tool for investigating cancer-specific microRNA and transcription factor co-regulatory networks
User: rilletlee
Home Page: http://www.cbportal.org/CMTCN/
mirna,A software to detect genome-wide miRNA-gene enrichment signal.
User: saorisakaue
mirna,Simulation of interactions miRNA:Competing Targets
User: selcenari
mirna,MirMachine, a command line tool to detect microRNA homologs in genome sequences.
User: sinanugur
Home Page: https://mirmachine.readthedocs.io
mirna,myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry
Organization: sing-group
mirna,scripts and resources for performing miRNA sequencing analysis using tools like mirPRo and miRDeep2. Explore the code to process reads, map them to the genome, quantify known miRNAs, identify novel miRNAs, and browse the results
User: sivkri
mirna,Search genome loci using the miRNA sequence
User: southerncd
mirna,Characterization of small RNA pathways
User: stupornova33
mirna,Off-target analysis of siRNA knock down paired with RNAseq
User: tacazares
Home Page: https://tacazares.github.io/SeedMatchR/
mirna,Using RNA-Seq data to improve microRNA target prediction accuracy in animals
User: tbradley27
Home Page: https://tbradley27.github.io/FilTar/
mirna,Analyze single-cell miRNA sequencing data from HL-60 cells along a 7-day time-course of ATRA treatment.
User: yanndubs
Home Page: https://yanndubs.github.io/miRNAseq-Analysis/
mirna,Snakemake workflow for the mapping and quantification of miRNAs and isomiRs from miRNA-Seq libraries.
Organization: zavolanlab
mirna,LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network
User: zhangjunpeng411
mirna,miRSM: Inferring miRNA sponge modules by integrating expression data and miRNA-target binding information
User: zhangjunpeng411
mirna,Identification and analysis of miRNA sponge regulation
User: zhangjunpeng411
mirna,Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data
User: zhangjunpeng411
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