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Stickers for some Bioconductor packages

This repository contains stickers for some Bioconductor packages. Fork this repo and create a pull request if you would like to add a sticker for your package too. If you would like to modify existing ones, please open an issue and discuss changes with the sticker maintainer.

Package stickers

Stickers for events

Stickers for some of the Bioconductor events.

Diversity-affirming stickers

Stickers for boards and organizations

Sticker development guidelines

To start with a new sticker you might want to use one of the templates (gimp_template.xcf (gimp format) or inkscape_template.svg (Inkscape format)) or you might want to look at the hexSticker package to produce the sticker entirely in R.

You can also find a tutorial Sticker_instructions.png to design your stickers manually in Illustrator.

  • Each sticker should be put into a folder named according to the package.
  • Each folder should also contain a README.md providing at least the name of the package and the designer/maintainer of the sticker (which is not necessarily the maintainer of the package).
  • Also add a licence under which you share your sticker in the README.md file. A CC-BY-type licence would be a sensible choice here. Otherwise, CC0 applies (see below).
  • The height of the final png should be 5cm, resolution should be at least 300dpi.
  • While it is not mandatory, it is suggested to use the Aller font for the text (available in folder fonts/Aller.
  • Ideally, the position of the package name text (bottom line) should be 18mm from the top of the image.
  • Some suggestions for color definitions: http://www.flatuicolorpicker.com/category/all .

License

Except where otherwise stated, the content and the stickers in this repository are licensed under a CC0 1.0 Universal (CC0 1.0) Public Domain License.

You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. See more details here.

biocstickers's People

Contributors

al2na avatar alexanderpico avatar anhtr avatar brennanpincardiff avatar csoneson avatar davismcc avatar drighelli avatar dtm2451 avatar federicomarini avatar felixernst avatar guangchuangyu avatar jorainer avatar kdkorthauer avatar kevinrue avatar kozo2 avatar kstreet13 avatar kzeglinski avatar laurenhsu1 avatar laurentgatto avatar lazappi avatar lgatto avatar liesasalzer avatar link-ny avatar lpantano avatar lshep avatar mikelove avatar mritchie avatar robbie90 avatar sgibb avatar stemangiola avatar

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biocstickers's Issues

Reconsider license

It's very difficult to add attribution to a sticker which limits reuse possibilities.

BioC2022 sticker

I guess there's need for a sticker for BioC2022.

Marcel (@LiNk-NY) do you want to take over that one - or anybody else? Alternatively, I could also give it a try, but maybe it would be good to have a little more diversity (I mean not always the same people designing the stickers)?

Actually, I don't even don't know where it will take place? @lwaldron ?

Function to create a sticker

Based on @GuangchuangYu's script, I created the make_sticker function to make it easier to re-use and adapt. It's rough around the edges but a decent start. Suggestions and patches welcome.

 make_sticker()

mypackage

library("ggplot2")
p <- ggplot(aes(x = mpg, y = wt), data = mtcars) + geom_point()
x <- make_sticker(p, "Bioconductor", 
                  grob_xmin = 0.5, grob_xmax = 1.5,
                  grob_ymin = .35, grob_ymax = 1.25)

bioconductor

cleaver stickers

I add some stickers for the cleaver package but I am unsure which one is the best. Any votes?
cleaver
cleaver2

I tried to use the sticker package but then the "logo" was cut at the margins:

cleaver3

I have absolutely no experience with ggplot2. I would be very happy if someone could help me to fix the code so I can remove my own cleaver_sticker.R and cleaver_sticker2.R and use the sticker correctly: https://github.com/jotsetung/BioC-stickers/blob/master/cleaver/cleaver_sticker3.R

(initially I wanted to draw a cleaver but drawing circles was much easier ...)

License

I think it is important to have license for all the stickers. I have added a default CC-BY license in the repo README.md, and would suggest for author to specify their license in their sticker-specific README.md.

Sticker for EuroBioc 2020

Euro Bioc 2020 will be organised in Padova - if OK for you @drisso I would create one (unless you have somebody else already). Any suggestions or landmark or similar specific for Padova?

Bioc2019 logo/sticker

Hi @jotsetung - we will need a logo/sticker for the Bioc2019 conference in New York. Given your successful track record of conference and workshop stickers, you might be keen to give this one a go to.

Cc @lwaldron @mtmorgan

mzR sticker

The yellow might be still a little too bright - but making it darker makes it too similar to the MSnbase color I feel.

How to order stickers

To order our stickers via StickerMule I see currently two possibilities:

The centralized market place

To have a dedicated marketplace at StickerMule similar to that what RStudio has (https://www.stickermule.com/user/1070448958/stickers) we would need:

  • A person (ideally from Bioconductor) orders all stickers (and each time a new sticker is created/added) at a reasonable count size (e.g. 50 stickers, 100 etc).
  • Once the stickers are ordered, this person could add them to his/her marketplace in StickerMule (ideally design the marketplace so that it's looking like an official Bioconductor store - similar to the one RStudio has).
  • On each sticker that it is added to the marketplace it is possible to add a profit percentage. Base price will be 2.46 Eur, an 1% profit margin would mean a 2.48 price and 0.02 Eur profit on each ordered sticker.

People that are interested in the stickers can order them and the original user gets credit for each order.

De-centralized market place

Instead of having one market place, each sticker creator orders his/her stickers and puts them on his/her marketplace.
A link to this market place should be placed into the sticker's README.md.

Repository Rename

I was wondering if you are all satisfied with the naming of the repository.
BiocStickers would be more appropriate to Bioconductor recommendations. Minor issue but I can change it with enough votes.

PS. Don't forget to update your remote URLs

Ownership of stickers / sticker maintainers

I personally would like to allow sticker maintainers/developers to be different from package maintainers. If sticker maintainers are different from package maintainer the sticker developer/maintainer should however at least inform the package maintainer and get his/her OK.

The sticker's README should list both, the sticker developer/maintainer and the package maintainer.

@lgatto @sgibb @GuangchuangYu @LiNk-NY what do you think?

Sticker guidelines

I think we should have some general guidelines in addition to the template. The guideline could refer to the template and indicate some basic meta-data need for each sticker, with, at least, a maintainer and a link to the package. A README.md file would be a simple way.

First collection stickers

First of all thanks @Robbie90 for uploading the stickers!
I was just wondering, do you think it would be possible to put the sticker for each package into its own folder? We would then have a common sort-of layout and it might be easier for users to find the sticker/package they are looking for.

Repository Transfer

Hi Johannes @jotsetung,
We love the stickers you've made for Bioconductor packages! It would be great if we can keep the repository under the Bioconductor GitHub account.
As you know, I've spoken to Matthew Ritchie and he is willing to publish the designs he and Roberto Bonelli have been working on for a different set of Bioconductor stickers. It would be great to have a centralized repository for the sticker efforts under the Bioconductor account with appropriate credit (of course).

Looking forward to it!

Best regards,
Marcel

cc: @mtmorgan

CSAMA 2019

@jorainer - it looks like the latest CSAMA sticker is missing, at least from the main README file.

Common text alignment?

Up to now we don't have a common vertical alignment of the text. I think it would be nice if the text could be, where possible, somehow aligned to have a more streamlined design. I would however not make this mandatory.

Package reviewer sticker

I made a sticker for Bioconductor package reviewers. I'm actually quite happy with it but feedback is welcome (maybe @lshep ?) - if OK I'll add it to the repo. Whether and how it's going to be distributed to the package reviewers is a different topic...

BiocReviewer

Idea: a BiocHexwall

Some of you might have seen the Hexwall back in useR Brisbane 2018 - the wall of stickers, clustered by color, and shaped as Australia (a nice writeup is here: https://www.mitchelloharawild.com/blog/user-2018-feature-wall/)

When I saw Martin’s keynote in Toulouse it was “just stickers” from Bioc, so I thought, let’s do a “BiocHexwall”.

So there I started to work on a repo, namely https://github.com/federicomarini/biochexwall. That is the writeup of code I have till now. The idea is to take the note and fill that with stickers.

I have to admit I am stuck at the point where the image needs to be converted to hex-positions, but maybe it is a fun side-idea to work with - and some other Bioc folks might have a little more talent than my tiny spatial skills.

Following up a conversation with @lgatto , here is the quick description of it 😃

In the end, I almost feel we are two commands away from having a nice note filled with stickers
(gut feeling) - yet, these two commands are missing in my head and in my current solution.

Anyone with some ideas on this who wants to chip in?

CSAMA 2020 sticker

I've started playing around with a sticker for this year's CSAMA workshop. The main question now is which background color to use. I have 3 options:

  1. light blue
    CSAMA2020

  2. "sky" blue
    CSAMA2020_SummerSky

  3. darker blue
    CSAMA2020_SanMarino

My favorite is 3), which reflects most the deep blue sky we have up in the mountains but I'm a little afraid it might be a little too dark. Version 1) is the one I like the least.

Happy for any feedback @mtmorgan @wolfganghuber @lgatto @csoneson @mikelove et al.

Colors for MS based stickers

I thought we could use yellowish-reddish colors for the MS based packages, with lower level packages (mzR) using brighter, higher level packages (e.g. xcms) darker colors. Suggestion: mzR yellow, MSnbase orange, xcms red. @lgatto @sgibb any thoughts?

EuroBioc2019 sticker

Very first draft of the sticker for the EuroBioc2019 meeting in Brussels:

WCM0187

the idea is to show the atomium and one of the spheres being the Bioconductor note.

Just want to get some initial feedback before I start doing serious stuff. @lgatto , @mtmorgan (who else is on the committee?)

Also, are there any specific colors associated with Brussels I should/could use? @lgatto?

Stickers with highlight vs flat stickers

I played a little around with adding a highlight to the stickers, somewhat similar to the one in @Robbie90's stickers. Since the sticker itself has a hexagonal shape I thought it might be cool to use the hexbinplot to create the highlight. Result for FamAgg is shown below. Not sure though if it has the desired effect. Eventually check also the AnnotationFilter.
famagg
famagg_hl

@Robbie90 @mritchie @lgatto @LiNk-NY any feedback highly welcome.

EuroBioC 2022 Sticker

Open for suggestions what to use as logo/sticker for EuroBioC 2021|22 conference which will be held in Heidelberg.

pRoloc stickers

@lgatto , have you considered to use a slightly transparent rectangle behind the text (for better readability)? I did something like that in mzR (transparent color gradient)

BioC Asia 2021 hex sticker

Hi @jorainer
I'm Kozo Nishida. I will be in charge of organizing BioC Asia 2021.
I would like to ask you to design a BioC Asia 2021 sticker.
I would like you to utilize the BioC 2021 sticker for the BioC Asia 2021 sticker design.
https://github.com/Bioconductor/BiocStickers/tree/master/events/Bioc2021
Specifically, I would like ask you to replace Mt. Rainier with Mt. Fuji, a Starbucks mug with a Japanese tea cup, and green plant with Japanese bonsai plant (on the BioC 2021 sticker).

Can I ask you to create BioC Asia 2021 sticker by deriving it from BioC 2021 design?
BioC Asia 2021 will be held after BioC 2021(July?). Therefore, I would appreciate it if you could design the BioC Asia 2021 sticker by July.

BiocExplorer sticker

@Robbie90
We don't usually accept stickers of packages that are not part of Bioconductor..
Please submit the package or remove the sticker until it is an accepted package.
Thanks

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