Name: Keegan Korthauer
Type: User
Company: University of British Columbia and BC Children's Hospital Research Institute
Bio: Assistant Professor, University of British Columbia
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Investigator, BC Children's Hospital Research Institute
Location: Vancouver, BC | Canada
Blog: https://www.korthauerlab.com/
Keegan Korthauer's Projects
Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=annotatr.
Analysis of Overdispersed Data
Check if a package name is available to use
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
Benchmarking study of recent covariate-adjusted FDR methods
Shiny App for exploring results from "A practical guide to methods controlling false discoveries in computational biology"
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
Devel repository for bsseq
bumphunter
Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
Code to reproduce results of the dmrseq paper
European Bioconductor Meeting 2018
False discovery rate regression
Vignette for Single-Cell workshop at Festival of Genomics California 2016
Fun little helper script to randomize assignments in a gift exchange pool
Links to slides for talks at the 2016 Joint Statistical Meetings in Chicago
Personal website (archived)
Collaboration with Cathy Wu - Merkel Cell Carcinoma
Pretty heatmaps
web page
Reanalysis of the repressive capacity of promoter DNA methylation