Felix Ernst's Projects
Challenges for the Biocoductor community.
:whale: Container - BioC devel custom version
Computable build reports, package metadata, and download stats from the Bioconductor project
:whale: Docker image - BioC release custom version
Automate package and project setup for Bioconductor packages
Efficient manipulation of biological strings
Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
Drat R Archive Template
:package: EpiTxDb: storing and accessing epitranscriptomic information using the AnnotationDbi interface
AnnotationDb for post-transcriptional modifications (Hsapiens.hg38)
AnnotationDb for post-transcriptional modifications (Mmusculus.mm10)
AnnotationDb for post-transcriptional modifications (Scerevisiae.sacCer3)
:octocat: Pages
Bioconductor defining a SummarizedExperiment class for microbiome data
:package: Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.
wrapper for revigo analysis
:package: RNAmodR: detection of post-transcriptional RNA modifications based on HTS data
:package: RNAmodR.AlkAnilineSeq: detection of m7G, m3C and D modification by AlkAnilineSeq
:package: :floppy_disk: Example data for RNAmodR package
:package: RNAmodR.ML: machine learning for detection of post-transcriptional RNA modifications
:package: RNAmodR.RiboMethSeq: detection of 2'-O methylations by RiboMethSeq
An R package for visualizing classifier performance (Sing/Sander/Beerenwinkel/Lengauer [2005] Bioinformatics)
Clone of the Bioconductor repository for the scater package.
:package: Structstrings: implementation of Biostrings to work with dot bracket annotations
An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent