Name: James Sacco
Type: User
Company: Laboratory for Genomics Research UCSF-Berkeley-GSK
Bio: Bioinformatics Programmer at the LGR - Laboratory for Genomics Research, San Francisco, CA, USA; Contributor to @ucsf-lgr
Location: San Francisco, CA, USA
Blog: https://jsacco1.github.io/
James Sacco's Projects
Minimal examples of data structures and algorithms in Python
Applied Computational Genomics Course at UU: Spring 2020
Investigate the role of ambient shipment temperature and turn-around time (TAT) on immune assay performance, as measured in mean spot count for anti-CD3 positive control.
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
:gem: A curated list of awesome Competitive Programming, Algorithm and Data Structure resources
List of software/websites/databases/other stuff for genome engineering
A curated list of awesome deep learning applications in the field of computational biology
😎 A curated list of awesome GitHub Profile READMEs 📝
List of software packages for multi-omics analysis
A curated list of awesome Python frameworks, libraries, software and resources
A curated list of awesome R packages, frameworks and software.
A curated list of awesome READMEs
A curated list of awesome command-line frameworks, toolkits, guides and gizmos. Inspired by awesome-php.
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A curated list of awesome statistics resources
A list of awesome resources for tmux
Amazon Simple Storage Service (S3) API Client
🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.
Docker Containers for Bioconductor - NEW!
Workshop for Bioc2019 for using Bioconductor on containers
:microscope: Path to a free self-taught education in Bioinformatics!
BLAST parse
BLENDER is a companion program to the DISCOVER-Seq assay to identify off-target editing sites from MRE11 ChIP-Seq experiments.
This repository is a collection of famous books that a person who has keen to learn programming, should go through in his career.
Accelerated deep learning R&D
CHANGE-seq analysis pipeline
testing out C++
CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens