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rnaimehaom's Projects

pharao icon pharao

Pharmacophore alignment and optimization

pharmacodb icon pharmacodb

Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.

pharmatorch icon pharmatorch

One stop library for Drug Discovery from generation to synthesis

pharmd icon pharmd

MD pharmacophores and virtual screening

pharmer icon pharmer

mirror of https://svn.code.sf.net/p/pharmer/code/trunk

phil_lnp_modelling icon phil_lnp_modelling

Python code and jupyter notebooks to accompany the manuscript "Deep learning models for lipid-nanoparticle-based drug delivery"

philentropy icon philentropy

Information Theory and Distance Quantification with R

phmap icon phmap

Software for generating a surface charge based pH-profile map

phyclust icon phyclust

Phylogenetic Clustering (Phyloclustering)

phyd3 icon phyd3

Phylogenetic tree viewer based on D3.js

phygnn icon phygnn

physics-guided neural networks (phygnn)

phylo-software icon phylo-software

List of phylogenetic software. Original from Prof. Felsenstein's website https://evolution.gs.washington.edu/phylip/software.html

phylogeneticem icon phylogeneticem

Implementation of the EM algorithm for the detection of shifts in a phylogeny.

phyml icon phyml

PhyML -- Phylogenetic estimation using (Maximum) Likelihood

pic2smilespaper icon pic2smilespaper

paper for our implementation of pic2smiles - converting chemical molecular diagrams to SMILES representation

picalculax icon picalculax

Isoelectric point (pI) predictor for chemically modified peptides and proteins.

picard icon picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

pidginv2 icon pidginv2

PIDGIN Version 2: Prediction IncluDinG INactivity: Version 2 (LEGACY VERSION)

pikachu icon pikachu

Python-based Informatics Kit for Analysing Chemical Units

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