rnaimehaom Goto Github PK
Type: User
Type: User
Python script that receives a molecular dynamics or Monte Carlo trajectory and performs agglomerative clustering to classify similar structures.
Code used in the generation of results for "A Unified AI Framework for Solubility Prediction Across Organic Solvents"
R package for finding a joint low-rank representation for a collection of matrices with shared row or column entities.
(Python, R, C) Collective (multi-view/multi-way) matrix factorization, including cold-start functionality (recommender systems, imputation, dimensionality reduction)
Controlled Molecule Generator for for Optimizing Multiple Chemical Properties
Spring 2021 - Automation of Scientific Research - course project
A set of scripts developed for text tokenization and processing of the prediction results of naive-based chemical named entity recognition disclosed in the paper "Chemical named entity recognition in the texts of scientific publications using the naïve Bayes classifier approach"
All the codes and data used in "Inverse design of soft materials via a deep-learning-based evolutionary strategy", by G. M. Coli, E. Boattini, L. Filion, and M. Dijkstra.
Chemical Identification from images using a CNN
A code where I trained a machine learning (CNN) model using pytorch to predict the efficacy of a drug using pIC50 as a measure
CNVScope: Visually Exploring Copy Number Aberrations in Cancer Genomes
OCR/OCSR on handwritting ⏣/chemical-structural-formulas with YOLO & CRNN models.
Compilation of R and Python programming codes on the Data Professor YouTube channel.
A different take on codon optimization
Solving a codon optimization problem by an ILP model (commercial solver)
Use machine learning to design codon-optimized DNA sequences for increased protein expression.
A neural based approach to the task of genetic codon optimization
A Github action to codon optimize sequences.
Script to optimize protein-coding DNA sequences with natural codon usage
https://www.nature.com/articles/s41598-020-74091-z#Tab1
Using protein-per-mRNA differences among human tissues in codon optimization
Codonopt program is designed for codon optimization of protein sequences. The core of it based on the mathematical codon optimization proposed by Şen et al. (2020)
Lowers GC% of sequence and avoids reducing codon frequency
DNA Codon Optimizer
Codon optimization script built on DNAChisel with RSCU calculation from the CAI module
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.