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rnaimehaom's Projects

catboost icon catboost

A fast, scalable, high performance Gradient Boosting on Decision Trees library, used for ranking, classification, regression and other machine learning tasks for Python, R, Java, C++. Supports computation on CPU and GPU.

catmap icon catmap

Catalyst Micro-kinetic Analysis Package for automated creation of micro-kinetic models used in catalyst screening

caviar icon caviar

Protein cavity identification and automatic subpocket decomposition

cbh21-protein-solubility-challenge icon cbh21-protein-solubility-challenge

Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinformatics Hackathon 2021.

cbioportalr icon cbioportalr

R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases

ccbmlib icon ccbmlib

Modeling Tanimoto distributions for RDKit

cclib icon cclib

Parsers and algorithms for computational chemistry logfiles

cddd icon cddd

Implementation of the Paper "Learning Continuous and Data-Driven Molecular Descriptors by Translating Equivalent Chemical Representations" by Robin Winter, Floriane Montanari, Frank Noe and Djork-Arne Clevert.

cddd-1 icon cddd-1

Partial implementation of the Paper "Learning Continuous and Data-Driven Molecular Descriptors by Translating Equivalent Chemical Representations" by Robin Winter, Floriane Montanari, Frank Noe and Djork-Arne Clevert.

cdhit icon cdhit

Automatically exported from code.google.com/p/cdhit

cdk icon cdk

The Chemistry Development Kit

cdkbook icon cdkbook

Groovy Cheminformatics with the Chemistry Development Kit

cdkr icon cdkr

Integrating R and the CDK

cdpkit icon cdpkit

The Chemical Data Processing Toolkit

cec icon cec

Cross-Entropy Clustering R Package

celda icon celda

Bayesian Hierarchical Modeling for Clustering Single Cell RNA-Seq Data

cellprofiler icon cellprofiler

An open-source application for biological image analysis

centres icon centres

Perception and labelling of stereogenic centres in chemical structures

cepa icon cepa

Centrality-based pathway enrichment

cetoxa icon cetoxa

A Computational Ecotoxicology Assay

cg-schnet icon cg-schnet

cG-SchNet - a conditional generative neural network for 3d molecular structures

cgcf-confgen icon cgcf-confgen

:test_tube: Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)

cgrtools icon cgrtools

CGRs, molecules and reactions manipulation

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