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transformer

Transformer seq2seq model, program that can build a language translator from parallel corpus

transformer-1

Transformer Search code

transformer-cnn

Transformer CNN for QSAR/QSPR modelling

transformer-model-for-prediction-in-low-chemical-data-regimes

This is the code for "Data augmentation and transfer learning strategies for reaction prediction in low chemical data regimes" paper.

transformer_retrosynthesis

This repository is based on several papers that have already presented a transformer model for the retrosynthesis of biomolecules.

transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

transformers-for-drug-design

transitive-ortholog-pipeline

Generate transitive orthologs for all species based on HUMAN orthologs.

transmol

transformer vae for molecule generation

transpep

Learning biological features of signal peptides with transformer neural networks.

transvae

A Transformer Based VAE Architecture for De Novo Molecular Design

transvar

TransVar - multiway annotator for precision medicine

treecluster

Efficient phylogenetic clustering of viral sequences

treedist

Calculate distances between phylogenetic trees in R

treegrafter

TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.

treelink

Data Integration, Clustering and Visualization of Phylogenetic Trees

treesearch

R package for phylogenetic tree search under custom optimality criteria

treetools

Create, modify and analyse phylogenetic trees in R

treetuner

A pipeline for minimizing redundancy and complexity in large phylogenetic datasets

treewas

treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes

tremd-gromacs

Script to run Replica Exchange Molecular Dynamics simulation in GROMACS

triebeard

Radix trees in Rcpp and R

trimgalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

trimmomatic

trip

A Prior of a Googol Gaussians: a Tensor Ring Induced Prior for Generative Models

trna_thread

Scripts and resources for automated homology modeling of tRNAs

troj

Toolbox for evaluation of chemical properties of substances.

trscreening

Bidirectional screening for drug discovery

trust

Efficiently search and mine for specific (targeted) classes/slices in your dataset to improve model performance and personalize your models.

tsdfgs

Training set determination for genomic selection