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rnaimehaom's Projects

faiss icon faiss

A library for efficient similarity search and clustering of dense vectors.

faiss_kmeans icon faiss_kmeans

K-Means clustering of molecules with the FASS library from Facebook AI Research

fakhraei_tcbb2014 icon fakhraei_tcbb2014

Data and code of the experiments for "Network-Based Drug-Target Interaction Prediction with Probabilistic Soft Logic"

falkon_paper icon falkon_paper

FALKON implementation used in the experimental section of "FALKON: An Optimal Large Scale Kernel Method"

fame-1 icon fame-1

Code for the paper "FAME: Fragment-based Conditional Molecular Generation for Phenotypic Drug Discovery", published on SDM 2022.

familiar icon familiar

Repository for the familiar R-package. Familiar implements an end-to-end pipeline for interpretable machine learning of tabular data.

famsa icon famsa

Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

fasano.franceschini.test icon fasano.franceschini.test

An R implementation of the multidimensional Kolmogorov-Smirnov two-sample test as defined by Fasano and Franceschini (1987).

fasmifra icon fasmifra

Molecular Generation by Fast Assembly of SMILES Fragments

fast icon fast

Fusion models for Atomic and molecular STructures (FAST)

fastadi icon fastadi

Self-Tuning Data Adaptive Matrix Imputation

fastavector icon fastavector

A C library for reading/writing entire fasta files. Fasta files are loaded into internal buffers that store all headers and sequences such that each sequence and header can be found via a simple lookup function.

fastflow icon fastflow

FastFlow is a system that automatically detects CPU bottlenecks in deep learning training pipelines and resolves the bottlenecks with data pipeline offloading to remote resources .

fastflow-tensorflow icon fastflow-tensorflow

A customized Tensorflow with partial offloading and profiling features for FastFlow project.

fastghquad icon fastghquad

R package for fast, numerically-stable Gauss-Hermite quadrature

fastjtnnpy3 icon fastjtnnpy3

AI for discovering 100% valid drug like molecules, a combination of VAE-JTNN and bayesian optimization, an optimized Python 3 Version of Junction Tree Variational Autoencoder for Molecular Graph Generation (ICML 2018)

fastmatrix icon fastmatrix

Fast computation of some matrices useful in statistics

fastp icon fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

fastr2 icon fastr2

Foundations and Applications of Statistics: An Introduction Using R

fasttext icon fasttext

R package for 'Efficient Learning of Word Representations and Sentence Classification'

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