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cirgo

civic-client

Web client for CIViC: Clinical Interpretations of Variants in Cancer

civic-server

Backend Server for CIViC Project

civic2clinvar

extraction of CIViC variants into the clinvar submission format

cld

A software for the multispecies design of CRISPR/Cas9 libraries

cleaver

Cleavage of polypeptide sequences

cleveralgorithms

An open source book that describes a large number of algorithmic techniques from the the fields of Biologically Inspired Computation, Computational Intelligence and Metaheuristics in a complete, consistent, and centralized manner such that they are accessible, usable, and understandable.

cleveralgorithmsmachinelearning

Defunct

clin_seqr

a shiny app to visualize clinical RNA-seq and compare to GTEX

clingen2016

clinker

Gene Fusion Visualiser

clinvar

This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file.

clonealign

Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data

clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.

clusternomics

Integrative clustering for heterogeneous biomedical datasets.

clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

cmapper

cncdriver

Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers

cnspector

Web-based copy number browser.

cnvnator

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

cnvranger

Functionality for CNV analysis

co-occuring_mutations

codonoptimizer

Simple scripts to perform codon optimization

cola_examples

cola analysis for TCGA GBM dataset

compgen2018

teaching material for compgen2018 course

complete-python-bootcamp

Lectures for Udemy - Complete Python Bootcamp Course

complexheatmap

Make Complex Heatmaps

complexheatmap-1

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html Contributions: https://github.com/jokergoo/ComplexHeatmap. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ComplexHeatmap.

complexheatmap-reference

Documentation of ComplexHeatmap package

compomics-utilities

Open-source java library for computational proteomics