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cbioportal-frontend

React Frontend of cBioPortal :tada:

ccal

Computational Cancer Analysis Library

ccnetviz

JavaScript library for visualization of large-scale network graphs using WebGL

ccsviewr

R-based CCS output viewer

cdips_tutorial_2017

Tutorial on Data Manipulation in Python

central-dogma

A simple web application for teaching students about transcription and translation of DNA into RNA into protein.

cepa

Centrality-based pathway enrichment

charger

Characterization of Germline variants

chasmplus

Predicts whether missense mutations will drive growth of human cancers

cheatsheets

Quick lookup documents for commonly used tools

checkphredscale

Check the Phred Scale quality of sequencing files

cheminformaticsbook

chemstationmsfilereader

Allows for reading Agilent Chemstation .D folders using Dot.NET

chimera

github for Bioconductor chimera package

chimeraviz

chimeraviz is an R package that automates the creation of chimeric RNA visualizations.

chimpipe

ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data

chip-seq_preprocess

A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.

chipanalyser

chipseeker

:dart:ChIP peak Annotation, Comparison and Visualization

chipseq

ChIP-seq and ATAC-seq analysis

chipseq-installer

Installer for the ChipSeq Pipeline

chipseq_1day

chipseqqc

Automated analysis and interactive reporting for ChIP seq data.

chipulate

A Python3 framework to simulate read counts in a ChIP-seq experiment.

chromosomemappings

This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

cicero

CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.

circlize

Circular visualization in R

circlize_book

Documentation for circlize package

circsplice

CircSplice

circview

Sample-specific CircRNA Viewer