Name: Inamul Hasan Madar
Type: User
Company: Korea University
Bio: OncoProteoGenomics,
NGS based Genomics,
Mass Spectrometry based Proteomics,
Precision Medicine,Computational Biology, Bioinformatics.
Location: Seoul, South Korea.
Blog: http://ionchem.korea.ac.kr
Inamul Hasan Madar's Projects
The file Comparison Sampler console application compares two or more files (typically in separate folders) to check whether the start of the files match, the end of the files match, and selected sections inside the files also match. It is useful for comparing large files without reading the entire file. Alternatively, you can provide two folder paths and the program will compare all of the files in the first folder to the identically named files in the second folder.
findMutationThroughEome
Fast alignment-free pangenome creation and exploration
Structural variant pipeline
Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
Flexible File Sort Utility
Reproducible machine learning analysis of gene expression and alternative splicing data
Analysis of macrophage cell surface expression of CD14, CD16 and CD206 proteins using flow cytometry.
:books: Freely available programming books
A collection of free ebooks from Packt Publishing [Regularly Updated]
R package for functionally scoring phosphorylation sites
Clustering, PCA, heatmaps and enrichment analysis of rna-seq data
Practical on clustering, PCA, and GO enrichment for RNA-seq
Finder of Somatic Fusion Genes in RNA-seq data
(No maintenance) Detect gene fusion directly from raw fastq files
script for detecting fusion genes from several transcript alignment tools
FusionInspector code
a fast and accurate prediction tool for fusion genes from RNA-seq data
Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations
A generic tool to get genomic annotation for a generic set of IDs
:whale::bar_chart::books: Galaxy Docker Image to analyse RNA-Seq data
Galaxy RNA workbench
:microscope::books: Galaxy Tool wrappers