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nektar

NEw Kmer Tools for Analysis of Reads.

neoflow

NeoFlow is a standalone tool developed based on Nextflow and Docker and is developed for tumor neoantigens identification using DNA-Seq, RNA-Seq and MS/MS data.

netgestalt-pub

A data integration framework that allows simultaneous presentation of large-scale experimental and annotation data from various sources in the context of a biological network to facilitate data visualization, analysis, interpretation, and hypothesis generation.

nextrnai

nextrnai - a software package for the design of RNAi libraries

nf-co.re

Code and files for the main nf-core website >>>

ngcgh

Tools for producing pseudo-cgh of next-generation sequencing data

ngi-exoseq

ngi-smrnaseq

Nextflow Small RNA Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

ngi_visualizations

Development fork. Head fork here >>>

ngs-autoanalysis

Automation of the processing of NextGen Sequencing data @ CRUK-CI using Genologics Clarity LiMS

ngs-filters

Filters for false-positive mutation calls in NGS

ngs-in-bioc

A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor

ngs-pipe

NGS-pipe: next-generation sequencing pipelines for precision oncology

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

ngs-sandbox

install packages for ngs training and get example data

ngs_metrics

Software Suite to calculate metrics in FASTQ/BAM/VCF files and generate visual reports using python scripts

ngs_nextflow

(WIP!) NGS Nextflow Pipelines : Alignment, Variant Calling, GATK Best Practices

ngs_pipeline

Exome/Capture/RNASeq Pipeline Implementation using snakemake

ngsbase

Tutorial test

ngspipeline

NGS pipeline

nhgri-bw2

Software to automate tasks for performing biowulf2 analyses remotely from a different server.

nirvana

The nimble & robust variant annotator

nucleus

Python and C++ code for reading and writing genomics data.

obo-tutorial

A tutorial on using Open Biological and Biomedical Ontologies (OBO)

oddt

Open Drug Discovery Toolkit

odg

ODG: Omics Database Generator - Integration toolkit for -omics data

omicsev

A tool for large scale omics datasets evaluation

oncogrid

Javascript library for visualizing OncoGrids and related tracks

oncoimpact

Cancer-omics Data Integration

oncotator_singularity

oncotator singularity