Topic: prokaryotes Goto Github
Some thing interesting about prokaryotes
Some thing interesting about prokaryotes
prokaryotes,Sup. Table 1 from Rodríguez-Gijón and Nuy et al., 2022 (Front. in Microbiology)
User: alejandrorgijon
Home Page: https://doi.org/10.3389/fmicb.2021.761869
prokaryotes,Sequence processing and analysis code used to investigate the effects of different DNA extraction methods and PCR variability on multi-taxon DNA meta-barcoding estimates of soil biodiversity.
User: andrewd789
prokaryotes,A tool for dynamically calculating the codon usage bias in bacterial genomes and querying of a database for Codon Bias statistical analysis
User: briandehlinger
prokaryotes,🦠📇 Compare prokaryotic genomic assemblies
User: cmkobel
prokaryotes,panicmage can estimate gene gain and loss rates, the size of pan-genomes, and test for neutral evolution.
User: fbaumdicker
prokaryotes,Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
Organization: nf-core
Home Page: https://nf-co.re/metatdenovo
prokaryotes,Modelling evolution of genome size in prokaryotes in response to changes in their abiotic environment
User: pbentkowski
Home Page: https://ueaeprints.uea.ac.uk/50553/
prokaryotes,We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, and integrates them with additional computed features. This facilitates both the rapid discovery of ORFs and their prioritization for functional characterization.
User: rickgelhausen
prokaryotes,The International Code of Nomenclature of Prokaryotes Described from Sequence Data
Organization: seq-code
Home Page: https://seqco.de/seqcode
prokaryotes,Repository hosting code and manuscript materials for DISA project at IITD
User: sjohri20
prokaryotes,Variant Calling with Deep Learning for Prokaryotic genomes using TensorFlow. Adds (0 <= P(Variant) <= 1) to VCF files under INFO as abbreviated "ACC=".
User: tmsincomb
prokaryotes,UPHL's Reference Free Pipeline
Organization: uphl-biongs
prokaryotes,examination of genome size across all kingdoms
User: wrf
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