MRC Centre for Global Infectious Disease Analysis's Projects
CmdStanR: the R interface to CmdStan
comet
Severe malarial anaemia in the community
:package::package::arrow_right::classical_building: Conan the Librarian :crossed_swords:
Collated contact matrix data by country
🤝🤧 Systematic review of contact surveys relevant to transmission of respiratory pathogens 🤧🤝
:recycle: Reproduce an environment
🐔 COnstrained OPtimisation 🐔
Flexible simulation of P. falciparum genetic data
The Economist's model to estimate excess deaths to the covid-19 pandemic
Repository for analysis of alternative sources of COVID-19 mortality
Research compendium for analysis of COVID-19 mortality ascertainment
This is the COVID-19 CovidSim microsimulation model developed by the MRC Centre for Global Infectious Disease Analysis hosted at Imperial College, London.
Code to plot the figures and run the statistical analysis in: Anonymised & aggregated crowd level mobility data from mobile phones suggests initial compliance with COVID19 social distancing interventions was high & geographically consistent across UK
Shiny app collating the outputs of mrc-ide/covid19-forecasts-orderly
Short term forecasts of COVID-19 deaths in multiple countries
Repository for all scripts required to replicate the CFR analysis for paper submission.