MRC Centre for Global Infectious Disease Analysis's Projects
Mapping Plasmodium Spatial Connectivity from Genetic Data
Holds scripts etc. needed to reproduce all figures and tables from the PlasmoMAPI submission.
A basic Plasmodium simulator. Contains functions to simulate epidemiological and genetic data from a simple model of Plasmodium falciparum transmission.
Shiny app to show African and South American YF coverage
✉️ malariasimulation post processing ✉️
🦟✨⛓🎲 Plasmodium particle Markov chain chain Monte Carlo
Visualize R profiling data
:package::package::arrow_right::classical_building: Provision a library of R packages
V2 of Herd Immunity Android Controller
:computer::radio::syringe::chart_with_upwards_trend: Proximity-driven epidemic over bluetooth
Android app to control Zombie Sim 2 remotely
The Zombie Spatial Simulator Core
:walking::walking::walking: Prototype general queue
This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (REACT) study. It includes both code and data. For code-related enquiries please contact Oliver Eales: [email protected]
Re-writing the RECON TB practical (https://www.reconlearn.org/post/practical-tb.html) to run in the odin web interface
Repo for work on ICL Report 34 and subsequent Comm Med Methods Paper
Code for the referenced thermodynamic integration (TI) method of calculating model evidence
Collated data on repatriation flights from Wuhan, China, between 29th Jan - 27th Feb
Utilities for processing forecasts, does a lot of things semi-competently
:ring: Ring buffers
Mapping Averaged Pairwise Information in R
:one::writing_hand: R interface to the 'MNIST' collection of handwritten digits