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MRC Centre for Global Infectious Disease Analysis's Projects

queuer icon queuer

:walking::walking::walking: Prototype general queue

reactidd icon reactidd

This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (REACT) study. It includes both code and data. For code-related enquiries please contact Oliver Eales: [email protected]

recon_tb_to_odin icon recon_tb_to_odin

Re-writing the RECON TB practical (https://www.reconlearn.org/post/practical-tb.html) to run in the odin web interface

referenced-ti icon referenced-ti

Code for the referenced thermodynamic integration (TI) method of calculating model evidence

rincewind icon rincewind

Utilities for processing forecasts, does a lot of things semi-competently

rmapi icon rmapi

Mapping Averaged Pairwise Information in R

rmnist icon rmnist

:one::writing_hand: R interface to the 'MNIST' collection of handwritten digits

rrq icon rrq

:runner::runner::runner: Lightweight Redis queues

rtss-ce icon rtss-ce

Cost-effectiveness of RTS,S vs. scale-up of existing interventions.

rtss_vacc_antibody_model icon rtss_vacc_antibody_model

Implementation of the RTS,S vaccine antibody model developed by MT White (https://doi.org/10.1016/S1473-3099(15)00239-X).

safir icon safir

squire and friends individual rewrite

safir2 icon safir2

squire and friends individual rewrite rewrite

safir3 icon safir3

A version of safir with individual infectiousness

sarscov2-b.1.1.7 icon sarscov2-b.1.1.7

Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England (peer-reviewed)

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