wiedenhoeft / hammlet Goto Github PK

Fast Bayesian Hidden Markov Model with Wavelet Compression

Home Page: http://wiedenhoeft.github.io/HaMMLET/

License: GNU General Public License v3.0

Makefile 2.09% Python 7.70% Shell 0.85% C 3.04% C++ 84.69% HTML 1.62%

bayesian-data-analysis bayesian-inference bayesian-statistics bioinformatics genome genome-analysis genomics hidden-markov-model hidden-markov-models hmm machine-learning segmentation statistical-inference statistics time-series time-series-analysis wavelet wavelet-compression wavelet-transform wavelets

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robrollback sinozope wuhailing kimallam

hammlet's Issues

License

Hi!

I would like to test your approach, but before, I need to know the license type. Unless it's MIT, I would waste time testing, because I can't use it.

Thank you!
Armin

enforce a left to right transition

Would like to enforce a left to right transition across segments. Is there a way to modify the underlying transition matrix?

Where is ths master branch version?

On the master branch to direct people to the "biorx" on the "biorx" branch you do not recommend to use this version on production... so do you have a version we can test?

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