Topic: obofoundry Goto Github
Some thing interesting about obofoundry
Some thing interesting about obofoundry
obofoundry,AgrO describes agronomic practices, techniques, and variables used in agronomic experiments.
Organization: agriculturalsemantics
Home Page: https://bigdata.cgiar.org/resources/agronomy-ontology/
obofoundry,The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, licences, provenance and associated data.
User: allysonlister
obofoundry,A Python frontend to (Open Biomedical) Ontologies.
User: althonos
Home Page: https://pronto.readthedocs.io
obofoundry,BFO repository including source code and latest documents
Organization: bfo-ontology
obofoundry,Schema and generated objects for biolink data model and upper ontology
Organization: biolink
Home Page: https://biolink.github.io/biolink-model/
obofoundry,python library for working with ontologies and ontology associations
Organization: biolink
Home Page: https://ontobio.readthedocs.io/en/latest/
obofoundry,📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
Organization: biopragmatics
Home Page: https://pyobo.readthedocs.io
obofoundry,OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
User: callahantiff
Home Page: http://tiffanycallahan.com/OMOP2OBO_Dashboard
obofoundry,PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
User: callahantiff
Home Page: https://github.com/callahantiff/PheKnowLator/wiki
obofoundry,Repository for the Human Disease Ontology.
Organization: diseaseontology
obofoundry,The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance reported by a patient indicative of a disease”. Understanding the close relationship of Signs and Symptoms, where Signs are the objective observation of an illness, the Symptom Ontology will work to broaden it’s scope to capture and document in a more robust manor these two sets of terms. Understanding that at times, the same term may be both a Sign and a Symptom. The Symptom Ontology is available under CC0 license (https://creativecommons.org/publicdomain/zero/1.0/).
Organization: diseaseontology
obofoundry,Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds.
Organization: ebi-chebi
Home Page: https://www.ebi.ac.uk/chebi
obofoundry,Ontology for consent codes and data use requirements
Organization: ebispot
obofoundry,Ontology Lookup Service from SPOT at EBI
Organization: ebispot
Home Page: http://www.ebi.ac.uk/ols
obofoundry,A community-driven ontology for the representation of environments
Organization: environmentontology
Home Page: http://www.environmentontology.org
obofoundry,Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.
Organization: evidenceontology
Home Page: http://evidenceontology.org
obofoundry,The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Organization: foodontology
obofoundry,Source ontology files for the Gene Ontology
Organization: geneontology
Home Page: http://geneontology.org/page/download-ontology
obofoundry,Basic and Advanced OBO Graphs: specification and reference implementation
Organization: geneontology
obofoundry,A simple system for specifying OWL class design patterns for OBO-ish ontologies.
Organization: incatools
Home Page: http://incatools.github.io/dead_simple_owl_design_patterns/
obofoundry,Ontology Access Kit: A python library and command line application for working with ontologies
Organization: incatools
Home Page: https://incatools.github.io/ontology-access-kit/
obofoundry,Bootstrap an OBO Library ontology
Organization: incatools
Home Page: http://incatools.github.io/ontology-development-kit/
obofoundry,Integrated OBO ontology store
Organization: incatools
obofoundry,information artifact ontology
Organization: information-artifact-ontology
obofoundry,Ontology for emotions and affective phenomena
User: jannahastings
obofoundry,Simple Standard for Sharing Ontology Mappings
Organization: mapping-commons
Home Page: https://mapping-commons.github.io/sssom/
obofoundry,Python toolkit for SSSOM mapping format
Organization: mapping-commons
Home Page: https://mapping-commons.github.io/sssom-py/index.html#
obofoundry,LLM-driven curation assist tool (pre-alpha)
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/curate-gpt/
obofoundry,Data transformation framework for LinkML data models
Organization: monarch-initiative
Home Page: https://koza.monarchinitiative.org/
obofoundry,Medical action ontology
Organization: monarch-initiative
obofoundry,Mondo Disease Ontology
Organization: monarch-initiative
Home Page: http://obofoundry.org/ontology/mondo
obofoundry,LLM-based ontological extraction tools, including SPIRES
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/ontogpt/
obofoundry,Ontology for representing scientific evidence and provenance information
Organization: monarch-initiative
obofoundry,The Ontology for Biomedical Investigations
Organization: obi-ontology
Home Page: http://obi-ontology.org
obofoundry,OBO Organized Knowledge: Training materials for becoming an OBO engineer
Organization: oboacademy
Home Page: https://oboacademy.github.io/obook/
obofoundry,An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
Organization: obofoundry
Home Page: https://obofoundry.github.io/COB
obofoundry,Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Organization: obofoundry
Home Page: http://obofoundry.org
obofoundry,A system for managing OBO PURLs
Organization: obofoundry
obofoundry,An ontology of cell types
Organization: obophenotype
Home Page: https://obophenotype.github.io/cell-ontology/
obofoundry,Ontology for the description of human clinical features
Organization: obophenotype
Home Page: http://obophenotype.github.io/human-phenotype-ontology/
obofoundry,An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Organization: obophenotype
Home Page: http://obophenotype.github.io/uberon/
obofoundry,The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
Organization: obophenotype
Home Page: https://obophenotype.github.io/upheno/
obofoundry,RO is an ontology of relations for use with biological ontologies
Organization: oborel
Home Page: http://oborel.github.io/
obofoundry,ROBOT is an OBO Tool
Organization: ontodev
Home Page: http://robot.obolibrary.org
obofoundry, PATO - the Phenotype And Trait Ontology
Organization: pato-ontology
Home Page: https://pato-ontology.github.io/pato/
obofoundry,Repository for the Plant Ontology
Organization: planteome
obofoundry,Explore the Plant Trait Ontology on the Planteome site.
Organization: planteome
Home Page: http://browser.planteome.org/amigo/term/TO:0000387#display-lineage-tab
obofoundry,Name Reaction Ontology
User: rsc-ontologies
obofoundry,GSSO is the Gender, Sex, and Sex Orientation ontology, including terms related to gender identity and expression, sexual and romantic identity and orientation, and sexual and reproductive behavior.
User: superraptor
obofoundry,Collect of SO Ontologies
Organization: the-sequence-ontology
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