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Error:  Build failed for the package: clinvcf
 Info:  Nimble data file "/home/rpracella/.nimble/nimbledata2.json" has been saved."

./clinvcf --coding-first --genome GRCh37 ClinVarFullRelease_00-latest.xml.gz | bgzip -c > clinvar_GRCh37.vcf.gz
[2022-05-18T14:35:59] - clinvcf - INFO : [main] Genome assembly GRCh37
[2022-05-18T14:35:59] - clinvcf - INFO : [main] Parsing variants from ClinVarFullRelease_00-latest.xml.gz
[2022-05-18T14:39:44] - clinvcf - INFO : [main] clinvarSet=100000
[2022-05-18T14:42:47] - clinvcf - INFO : [main] clinvarSet=200000
[2022-05-18T14:45:20] - clinvcf - INFO : [main] clinvarSet=300000
[2022-05-18T14:48:15] - clinvcf - INFO : [main] clinvarSet=400000
[2022-05-18T14:51:18] - clinvcf - INFO : [main] clinvarSet=500000
[2022-05-18T14:54:01] - clinvcf - INFO : [main] clinvarSet=600000
[2022-05-18T14:56:50] - clinvcf - INFO : [main] clinvarSet=700000
[2022-05-18T14:59:34] - clinvcf - INFO : [main] clinvarSet=800000
[2022-05-18T15:02:20] - clinvcf - INFO : [main] clinvarSet=900000
[2022-05-18T15:04:48] - clinvcf - INFO : [main] clinvarSet=1000000
[2022-05-18T15:07:38] - clinvcf - INFO : [main] clinvarSet=1100000
[2022-05-18T15:10:19] - clinvcf - INFO : [main] clinvarSet=1200000
[2022-05-18T15:12:51] - clinvcf - INFO : [main] clinvarSet=1300000
[2022-05-18T15:15:16] - clinvcf - INFO : [main] clinvarSet=1400000
[2022-05-18T15:17:43] - clinvcf - INFO : [main] clinvarSet=1500000
[2022-05-18T15:20:10] - clinvcf - INFO : [main] clinvarSet=1600000
[2022-05-18T15:23:02] - clinvcf - INFO : [main] clinvarSet=1700000
[2022-05-18T15:25:36] - clinvcf - INFO : [main] clinvarSet=1800000
[2022-05-18T15:28:19] - clinvcf - INFO : [main] clinvarSet=1900000
[2022-05-18T15:31:30] - clinvcf - INFO : [main] clinvarSet=2000000
[2022-05-18T15:32:38] - clinvcf - INFO : [main] Sorting variants
[2022-05-18T15:32:44] - clinvcf - INFO : [main] Printing variants
SIGSEGV: Illegal storage access. (Attempt to read from nil?)

$ nimble install --verbose
   Warning: Package 'clinvcf' has an incorrect structure. The top level of the package source directory should contain at most one module, named 'clinvcf.nim', but a file named 'extractClinvarSet.nim' was found. This will be an error in the future.
      Hint: If this is the primary source file in the package, rename it to 'clinvcf.nim'. If it's a source file required by the main module, or if it is one of several modules exposed by 'clinvcf', then move it into a 'clinvcfpkg/' subdirectory. If it's a test file or otherwise not required to build the the package 'clinvcf.nim', prevent its installation by adding `skipFiles = @["extractClinvarSet.nim"]` to the .nimble file. See https://github.com/nim-lang/nimble#libraries for more info.
  Verifying dependencies for [email protected]
    Reading official package list
   Checking for hts@>= 0.2.20 & <= 0.2.23
 Installing hts@>= 0.2.20 & <= 0.2.23
    Reading official package list
Downloading https://github.com/brentp/hts-nim using git
    Cloning latest tagged version: v0.2.23
     Error: Could not read package info file in /tmp/nimble_496/githubcom_brentphtsnim_0.2.20_0.2.23/hts.nimble;
        ...   Reading as ini file failed with:
        ...     Invalid section: .
        ...   Evaluating as NimScript file failed with:
        ...     usr/lib/nim/pure/times.nim(79, 9) Error: cannot 'importc' variable at compile time.