Name: OpenAlea
Type: Organization
Bio: OpenAlea is an open source project aimed at the plant research community. It includes modules to analyse and model growth and functioning of plant architectures
Blog: http://openalea.rtfd.io
Official documentation is available at openalea.github.io
To install OpenAlea use conda
If you want to retrieve the code from git, use git clone. Then use this command that will retrieve all the submodules::
git submodule update --init --recursive
If you want to contribute to code, please have a look to github workflow
action-build-publish-anaconda
agroservices
AgroService is a Python package that provides access to IPM Web Services (at least) and a framework to easily implement Web Services wrappers. This package is intended to be close to the webservice. Therefore the requests will have the same API that each web service.
appveyor-ci
Tools for Using Conda in AppVeyor CI
braceroot
conda-deploy
Scripts for OpenAlea deployment using conda and/or docker
container
basic common datastructures
core
Core functionality of openalea
deepberry
deep-learning algorithm to detect and segment berries on grapewine images
deploy
OpenAlea.Deploy support the installation of OpenAlea packages via the network and manage their dependencies.
deploygui
OpenAlea graphical installer
docker-stacks
Ready-to-run Docker images containing Openalea applications
eartrack
An imaging library to detect and track future position of ears on maize plants
epymix
A Python Model to study Epidemic dilution and barrier factors in Mixture crops
fractalysis
3D Fractal Analysis. Application to Light Interception.
github-action-conda-build
A Github workflow to build your software package and publish to an Anaconda repository.
grapheditor
A generic graph visualisation and interaction OpenAlea library
hydroroot
Simulation of hydraulic root architecture
hydroshoot
Hydroshoot model for 3D hydraulic architecture simulation
infraphenogrid
A scientific workflow infrastructure for plant phenomics on the Grid
lignum
OpenAlea / Lignum interface
lpy
An open source python version of the Lindenmayer Systems.
misc
Miscealnous Administrative tools for OpenAlea developers
mtg
Multiscale Tree Graph datastructure and interfaces
oalab
OpenAlea Laboratory
oapkg
openalea
Official repository for OpenAlea and OpenAleaLab. Other repos in the openalea organization contain things like the website, documentation, projects, etc.
openalea-components
Openalea components
openalea-opencv
OpenAlea workflow for OpenCV
openalea-recipes
Conda recipes for OpenAlea
openalea-website
repository for sources of documentation
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