Name: OpenAlea
Type: Organization
Bio: OpenAlea is an open source project aimed at the plant research community. It includes modules to analyse and model growth and functioning of plant architectures
Blog: http://openalea.rtfd.io
Official documentation is available at openalea.github.io
To install OpenAlea use conda
If you want to retrieve the code from git, use git clone. Then use this command that will retrieve all the submodules::
git submodule update --init --recursive
If you want to contribute to code, please have a look to github workflow
phenomenal
Phenomenal: An automatic open source library for 3D shoot architecture reconstruction and analysis for image-based plant phenotyping
phenotrack3d
Phenotyping Maize over time
pkgit
PkgIt is a python packaging tool for Windows.
plantgl
An open-source graphic toolkit for the creation, simulation and analysis of 3D virtual plants.
plantlab
OpenAleaLab extension "plant"
plantscan3d
An open-source GUI for reconstructing plant 3D architecture from laser scans.
provenance
Provenance related tools for openalea
pycropml
CropML Python library
rsml
RSML : The language of root architecture
scanalea
Transition layer between PlantScan project and OpenAlea
sconsx
SConsX is an extension package of the famous SCons build tool.
sigflow
Architectural Model of flowering on fruit trees
strawberry
Strawberry architecture analysis and reconstruction
structureanalysis
Plant structure analysis
travis-ci
Tools for Using Conda in Travis CI
visualea
Visual Programming Workflow environment for OpenAlea
vpltk
walter
WALTer is a 3D FSPM Wheat model
weberpenn
Implementation of the tree model published by Weber & Penn
wlformat
Workflow environment definitions
xml_representation
Repository for options to describe a model unit in a declarative way. Imperative representation will be specific for each modelling framework.
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