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casboundary

Automated definition of integral CRISPR/Cas cassettes.

cdpfold

cfbest-pipeline

init cfBEST pipeline

cga

CERES predictions based on functional and genomic features

changeseq

CHANGE-seq analysis pipeline

charger

Characterization of Germline variants

chatgpt

🔮 ChatGPT Desktop Application (Mac, Windows and Linux)

chatgpt-web

使用 express 和 vue3 搭建的 ChartGPT 演示网页

chinese-llama-alpaca

中文LLaMA&Alpaca大语言模型+本地CPU部署 (Chinese LLaMA & Alpaca LLMs)

chiron

A basecaller for Oxford Nanopore Technologies' sequencers

cindela-toolbox

circleseq

circos

Mirror of cricos. "Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions. "

civitai

A repository of models, textual inversions, and more

clair3

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

clashx

clinvar

This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file.

cnvkit

Copy number variant detection from targeted DNA sequencing

cnvsingle

single cell/nuclei allele specific copy number

codecsuite

analysis pipeline for CODEC data

combat-seq

Batch effect adjustment based on negative binomial regression for RNA sequencing count data

complete-striped-smith-waterman-library

comut

CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots

conpair

Concordance and contamination estimator for tumor–normal pairs

cortado

Cortado is a re-implementation of CRISPResso to assess editing outcomes in batches of samples of CRISPR/Cas experiments.

counttofpkm

Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)

coveragemaster

cpi_drugbank2020

The dataset for CPI.

cpp-openmp-needleman-wunsch

:microscope: :checkered_flag: Comparison of DNA Sequences

cpython

The Python programming language