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bamdst

a lightweight bam file depth statistical tool

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers

baobab.lims

Baobab LIMS is an open-source laboratory information management system (LIMS)

batch-ge

bayexer

A Demultiplexing Tool for Illumina Sequencers

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bcl2fastq_pipeline

Our pipeline for converting bcl files to fastq

be-smart

A deep learning tool for CRISPR base editing efficiency prediction

beat

Beat8 -The Base Editing Analysis Tool

bedanno

Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104

bedeep

Local version of BEdeep models

bexplorer

bincrisp

Find CRISPRS in genomes using pilercr & draws a matrix

bioawk

BWK awk modified for biological data

biopython

Official git repository for Biopython (originally converted from CVS)

bioruby-svgenes

SVG format genome browser style pictures

bookskeeper

对各类图书资源的收集。大量计算机、AI方面书籍。

braker

BRAKER is a pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes

bunny

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

bwa-gasal2

BWA-MEM program accelerated with the GASAL2 library

bwa-mem2

The next version of bwa-mem

bwa-meme

Faster BWA-MEM2 using learned-index

bwapy

Python bindings to bwa mem

calitas

This repository is home to CALITAS, a CRISPR-Cas-aware ALigner for In silico off-TArget Search. CALITAS implements a customized gapped alignment of guide sequences to genomes and other reference sequences, returning consistent and non-redundant alignments.

canu

A single molecule sequence assembler for genomes large and small.

carrot

Free ChatGPT Site List 这儿为你准备了众多免费好用的ChatGPT镜像站点，当前100+站点

cas-offinder

An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.

cas-offinder-bulge

cas12a_manuscript

Notebooks for the manuscript Optimization of AsCas12a for combinatorial genetic screens in human cells.

cas13