DataJoint Workflow - Functional Calcium Imaging
DataJoint Workflow for functional calcium imaging combines multiple DataJoint Elements to process data acquired with ScanImage, Scanbox, Nikon NIS
, or PrairieView
acquisition software, using Suite2p or CaImAn analysis software. DataJoint Elements collectively standardize and automate data collection and analysis for neuroscience experiments. Each Element is a modular pipeline for data storage and processing with corresponding database tables that can be combined with other Elements to assemble a fully functional pipeline.
Installation and usage instructions can be found at the Element documentation.