Name: Wisam Reid
Type: User
Bio: (1) PhD Candidate, Harvard Medical School (2023), SHBT
(2) MA, Stanford University (2017), Music, Science, & Technology
(3) BS, UC Berkeley (2014), EECS
Location: Harvard/MIT
Blog: http://wisamreid.com
Wisam Reid's Projects
Neuronal dendrite calcium wave model (Neymotin et al, 2015)
Syllabi, handouts, and sketches for my creative coding course, 2D Animation and Interaction
Tools for analyzing 2p data
calculate filters for 2p opto
Example open source Python package with many of the fixings for PyPI publication
KITP tutorial codes for Active Brownian Particles
Progressive matrices dataset, as described in: Measuring abstract reasoning in neural networks (Barrett*, Hill*, Santoro*, Morcos, Lillicrap), ICML2018
This repository holds all the code for the site http://www.adventuresinmachinelearning.com
An implementation of piecewise linear time warping for multi-dimensional time series alignment
Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
A cortical network model of attention
Fast image augmentation library and an easy-to-use wrapper around other libraries. Documentation: https://albumentations.ai/docs/ Paper about the library: https://www.mdpi.com/2078-2489/11/2/125
Striving for Simplicity: The All Convolutional Net (All-CNN-C)
Open source code for AlphaFold.
this macro is intended to convert the z-stack, multichannel images from .lif files into individual tif files in a batch method.
Developing a classifier for tonotopic auditory maps
Classification tool of neuronal cell types based on Ca2+ data
Auto Mutual Information (Sequential Mutual Information) for temporal data.
Latent and generative models of animal vocalizations for songbirds, mice, primates, humans, cetaceans, etc.
A curated list of awesome data labeling tools
A curated list of awesome Janelia software
A curated list of awesome Machine Learning frameworks, libraries and software.
Tools, algorithms, and frameworks for managing and analyzing neural data.
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
Python notebooks with ML and deep learning examples with Azure Machine Learning Python SDK | Microsoft