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brentp avatar brentp commented on July 30, 2024 1

thanks for figuring this out. I am restructuring the hts-nim package now and will rename that file.

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brentp avatar brentp commented on July 30, 2024

can you use a single issue for all this? there are 2 issues in hts-nim and now this one.

You can look at https://github.com/brentp/mosdepth/blob/master/scripts/install.sh

to see how I install this. If you have nim and nimble installed, then it would be:

cd hts-nim && nimble install

and cd mosdepth && nim c -d:release mosdepth.nim

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unikzforce avatar unikzforce commented on July 30, 2024

sorry for scattered issues

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unikzforce avatar unikzforce commented on July 30, 2024

in windows "aux" is a reserved word, a file name should not start with aux
so hts/aux.nim creates errors, and nimble cannot proceed.

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unikzforce avatar unikzforce commented on July 30, 2024

after renaming aux to naux ---> nimble installed hts-nim successfuly

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nilsj9 avatar nilsj9 commented on July 30, 2024

@unikzforce I've managed to compile htslib on MSYS2, but still keep getting the error 'could not load: libhts.dll'. How did you create this file? Would you help me please?

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