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strain_phylogenetics's Issues

Upgrade to python3

Hello.

Nice package.

I noticed it is running on Python 2 though. Py2 has been sunsetted. Any plans to upgrade to Python3? Any particular reason it was written in Py2?

Thank you.

Anders.

cmake error

when compiling dev-c++ branch I got this an error at this step (on a MacBook):

(base) minh@Minhs-MacBook-Pro:~/software/strain_phylogenetics/build$ cmake  -DTBB_ROOT=${PWD}/../tbb   -DProtobuf_INCLUDE_DIRS=${PWD}/../protobuf-3.12.3/install/include/ -DProtobuf_LIBRARIES=${PWD}/../protobuf-3.12.3/cmake/build/libprotobuf.a -DProtobuf_PATH=${PWD}/../protobuf-3.12.3/cmake/build/lib64/cmake/protobuf .. 
-- The C compiler identification is AppleClang 11.0.3.11030032
-- The CXX compiler identification is AppleClang 11.0.3.11030032
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Error at CMakeLists.txt:7 (find_package):
  Could not find a package configuration file provided by "Protobuf" with any
  of the following names:

    ProtobufConfig.cmake
    protobuf-config.cmake

  Add the installation prefix of "Protobuf" to CMAKE_PREFIX_PATH or set
  "Protobuf_DIR" to a directory containing one of the above files.  If
  "Protobuf" provides a separate development package or SDK, be sure it has
  been installed.


-- Configuring incomplete, errors occurred!

Do you know how to fix this?

Thanks

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