yatisht / strain_phylogenetics Goto Github PK
View Code? Open in Web Editor NEWTools for analyzing and comparing SARS-CoV-2 phylogenies
License: MIT License
Tools for analyzing and comparing SARS-CoV-2 phylogenies
License: MIT License
Dear @yatisht,
The gif file is really cool, any tips for generating this, thanks.
Hello.
Nice package.
I noticed it is running on Python 2 though. Py2 has been sunsetted. Any plans to upgrade to Python3? Any particular reason it was written in Py2?
Thank you.
Anders.
when compiling dev-c++ branch I got this an error at this step (on a MacBook):
(base) minh@Minhs-MacBook-Pro:~/software/strain_phylogenetics/build$ cmake -DTBB_ROOT=${PWD}/../tbb -DProtobuf_INCLUDE_DIRS=${PWD}/../protobuf-3.12.3/install/include/ -DProtobuf_LIBRARIES=${PWD}/../protobuf-3.12.3/cmake/build/libprotobuf.a -DProtobuf_PATH=${PWD}/../protobuf-3.12.3/cmake/build/lib64/cmake/protobuf ..
-- The C compiler identification is AppleClang 11.0.3.11030032
-- The CXX compiler identification is AppleClang 11.0.3.11030032
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Error at CMakeLists.txt:7 (find_package):
Could not find a package configuration file provided by "Protobuf" with any
of the following names:
ProtobufConfig.cmake
protobuf-config.cmake
Add the installation prefix of "Protobuf" to CMAKE_PREFIX_PATH or set
"Protobuf_DIR" to a directory containing one of the above files. If
"Protobuf" provides a separate development package or SDK, be sure it has
been installed.
-- Configuring incomplete, errors occurred!
Do you know how to fix this?
Thanks
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