Name: Leonardo de Oliveira Martins
Type: User
Company: @quadram-institute-bioscience
Bio: Senior binfie @quadram-institute-bioscience (Norwich, UK). Phylogenomics and Data Sciences.
Location: Norwich, UK
I am Leonardo de Oliveira Martins, Head of Phylogenomics (Computational Biologist / Bioinformatician) at the Quadram Institute. I am on Mastodon
bioconda-recipes
Conda recipes for the bioconda channel.
bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
cumaru
Multiple sequence alignment using code from kalign3 (https://github.com/TimoLassmann/kalign) from TimoLassmann
curupixa
Low-level C library for phylogenetics. Currently under development
genefam-dist
C library for distance calculation between gene families and species trees, with a python module for creating a "signature" of a gene family tree.
jupyterblog
fastpages blog
leomrtns
github profile readme
leomrtns.github.io
github homepage
minimal-pathogen-agnostic-contextual-data-specification
An international minimal metadata standard for public health and One Health genomic surveillance.
notebooks
jupyter notebooks rendered into html pages
recomb-biomc2
Hiearchical Bayesian Model for Viral Phylogenetic Recombination
specimage
Python module to work with hyperspectral imaging data
super_distance
Supertree estimation from gene trees to species trees, using matrix representation with distances.
tauari
Python bindings to biomc2
wfa
Wavefront alignment algorithm (WFA): Fast and exact gap-affine pairwise alignment
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
