Giter Club home page Giter Club logo

bioconductornotes's Introduction

bioconductorNotes

This is Github repo containing notes / usage examples for various R/Bioconductor packages.

Analysis of Gene Expression data

  • limma - Analysis of gene expression data from microarrays or RNA-Seq platform technologies

Analysis of single cell RNA-Seq data

See scRNASeq folder

Analysis of DNA methylation data

  • minfi - Tools for analyzing and visualizing Illumina's 450k array data

Other

  • GEOquery - Accesses data on GEO

  • epivizr - Interactive visualization of genomic data in a browser. Supports Bioconductor data structures such as GenomicRanges and SummarizedExperiments

bioconductornotes's People

Contributors

stephaniehicks avatar

Watchers

avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.