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18.06 course at MIT
2019 single cell RNA sequencing Workshop @ UCD AND UCSF
Repo for Physalia course Analysis of Single Cell RNA-Seq data
Visualize & cluster one-mode projection of a bi-partite graph
Code supporting analyses in paper on fine-mapping AD loci
Analysis pipeline for the adolescent mouse nervous system project
R package with code for AMPAD consortia manuscript
Network Reverse Engineering through AP inference of Mutual Information
A curated list of community detection research papers with implementations.
Collection of cheatsheets for data science, machine learning and deep learning :).
List of software packages for multi-omics analysis
A curated list of awesome network analysis resources.
A curated list of nextflow based pipelines
Biclustering algorithm
Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila melanogaster
R scripts for Bayesian generalized linear model in La Manno 2016
Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data
Biology 202 Course Website
My notes/usage examples for various Bioconductor packages
Workshops for learning Bioconductor
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
BreastCancer Pathway Analysis performed for Nature/Nature Genetics paper 2017 (for ERNeg and Overall breast cancer)
This is a pipeline for calculating weights for TWAS
Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.
R code implementing QTL mapping of physiological, behavioral and gene expression phenotypes in Carworth Farms White (CFW) outbred mice.
Capture Hi-C gene prioritiser
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.