Topic: cfdna Goto Github
Some thing interesting about cfdna
Some thing interesting about cfdna
cfdna,R package to work with ctDNA sequencing data
User: alkodsi
Home Page: https://alkodsi.github.io/ctDNAtools/
cfdna,This repository contains the code used in the following publication: doi.org/10.1016/j.isci.2022.105487
User: benloklab
Home Page: https://doi.org/10.1016/j.isci.2022.105487
cfdna,Code for SCLC cfMeDIP-seq PRIME as described in the following paper: doi: 10.1016/j.isci.2022.105487
User: benloklab
cfdna,Important papers relating to the biology of cell free DNA
User: christacaggiano
cfdna,code for lung transplant cfdna project
User: christacaggiano
cfdna,cfDNA methylation probe design from mybaits targeted sequencing
User: christacaggiano
cfdna,Plasma cell-free DNA hydroxymethylomes discriminate disease state in EGFR-mutant non-small cell lung cancer.
User: ctlife
cfdna,As a tool for cancer subtype prediction, Keraon uses features derived from cell-free DNA (cfDNA) in conjunction with PDX reference models to perform both classification and heterogenous phenotype fraction estimation.
User: denniepatton
cfdna,Structural Variants in cell-free tumor DNA
User: drvenki
cfdna,FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.
Organization: epifluidlab
Home Page: https://epifluidlab.github.io/FinaleToolkit/
cfdna,Quality Control Workflow for UMI based BAMs
Organization: msk-access
Home Page: https://cmo-ci.gitbook.io/nucleo-quality-control/
cfdna,Workflow for making MSK-ACCESS standard binary alignment mapping file.
Organization: msk-access
Home Page: https://msk-access.gitbook.io/uncollapsed-bam-generation
cfdna,High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
User: ndbrown6
cfdna,Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
User: nickveltmaat
cfdna,Pattern Recognition for Cell-free DNA
Organization: opengene
cfdna,R package and vignette to denoise metagenomic cell-free DNA sequencing data.
User: pburnham50
cfdna,Cancer estimation based on nucleosomes: Analysis of proportion of circulating tumor DNA fragments compared to nucleosome references.
User: tobiasroikjer
cfdna,cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data
Organization: xwanglabthu
Home Page: https://xwanglabthu.github.io/cfDNApipe/
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