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Imagen data processing
Shell 4.27%
Python 16.61%
MATLAB 9.07%
HTML 70.05%
imagen_processing's Introduction
Imagen MRI data processing
freesurfer
- Segmentation of structural MRI data with FreeSurfer.
tbss_dti
- Preprocessing of DTI data with mrtrix, dtitk, ants and fsl (current version).
fsl_dti
- Preprocessing of DTI data with fsl (old version).
onsets_contrasts
- From CSV behavioral files to onsets.
rsfMRI_preprocessing
- Preprocessing of resting-state fMRI data with FSL and ANTS.
Obsolete FU2 processing code
spm_new_segment_FU2
- Segmentation of baseline and FU2 structural MRI data with SPM.
spm_preprocessing_FU2
- Preprocessing of baseline and FU2 task-based fMRI data with SPM.
spm_first_level_FU2
- 1st level processing of baseline and FU2 task-based fMRI data with SPM.