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imagen2 Goto Github PK

repos: 13.0 gists: 0.0

Name: Imagen

Type: Organization

Bio: A research project on risk taking behaviour in teenagers

Blog: https://imagen-project.org/

Imagen MRI data processing

freesurfer: Segmentation of structural MRI data with FreeSurfer.
tbss_dti: Preprocessing of DTI data with mrtrix, dtitk, ants and fsl (current version).
fsl_dti: Preprocessing of DTI data with fsl (old version).
onsets_contrasts: From CSV behavioral files to onsets.
rsfMRI_preprocessing: Preprocessing of resting-state fMRI data with FSL and ANTS.

Obsolete FU2 processing code

spm_new_segment_FU2: Segmentation of baseline and FU2 structural MRI data with SPM.
spm_preprocessing_FU2: Preprocessing of baseline and FU2 task-based fMRI data with SPM.
spm_first_level_FU2: 1st level processing of baseline and FU2 task-based fMRI data with SPM.

Imagen's Projects

geo-anonymization

geo location anonymization for IMAGEN project

imagen_archive

Archived scripts from XNAT server documentation

imagen_databank

Imagen databank operations

imagen_misc

Misclelaneous tools for database operations of the Imagen project

imagen_mri

Information on MRI datasets acquired for Imagen

imagen_pathways

Understanding the Interplay between Cultural, Biological and Subjective Factors in Drug Use Pathways

imagen_processing

Imagen data processing

imagen_publication

Imagen database, version 2

imagen_r

R scripts used to preprocess Imagen Psytools files

imagen_sftp_downloader

Python script to download data from the Image SFTP server

imagen_spss

SPSS scripts initially used to preprocess Imagen Psytools files

imagen_upload

Upload portal for the Follow Up 3 of Imagen

stratify_pseudonym

Generation of pseudonyms for projects STRATIFY / ESTRA

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