scastlara / plannet Goto Github PK
View Code? Open in Web Editor NEWWebsite to explore predicted planarian protein-protein interactions.
Home Page: https://compgen.bio.ub.edu/PlanNET
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compgenlabubplannet's Issues
Refactor code
Refactor models and views to improve my quality of life in the future.
"Show Homologs" not working when coming from PathwayFinder
When clicking on "View on NetExplorer" on the Results page of PathwayFinder, the visualization on NetExplorer does not include Homologs.
Two possible fixes:
- Change the query of PathwayFinder to include Homologs on the JSON.
- Make NetExplorer retrieve the homologs when a JSON without homologs is uploaded.
Can't retrieve Gene Card for Node without interactions but with homolog
Find nodes in DB with:
MATCH (n:Dresden)-[:HOMOLOG_OF]->(m:Human)
WHERE NOT (n:Dresden)-[:INTERACT_WITH]->()
RETURN n.symbol
LIMIT 3
e.g.: dd_Smed_v6_9755_0_1
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