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followers: 48.0 following: 103.0 repos: 148.0 gists: 9.0

Name: Russell Dinnage

Type: User

Company: Florida International University

Twitter: ecologician

Location: United States

Blog: www.mepheo.science

Russell Dinnage's Projects

ad-tests

Code to test different methods of Automatic Differentiation for solving traits evolution ODEs

afd

new version of afd analysis using docker

afd-manuscript

AFD Manuscript

afd-presentation

Presentation of my AFD project (Alignment Free Diversity)

australia_as_a_circle

Code for a blog post demonstrating how you can make Australia into a circle, and why you might want to.

bigpd

Code for BigPD project (assembling massive phylogenies and calculating PD)

billsbillsbills

R data package for cleaned 3d bird bill data from the Natural History Museum Mark My Bird Project

bioclim_intrinsic_dimension

Code to analyse the intrinsic dimension of the global Bioclim dataset

biocman

R package with bioclimatic manifold data

brms

brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan

brms_greta

Code to run brms style formula interface with Greta as backend instead of STAN

butcher

Reduce the size of model objects saved to disk

butterflies

Using deep learning to process images of butterflies from the NHM data portal

butterfly_generator

Code to generate butterflies, separating shape and wing pattern into different deep generative models

causal_pcm

Code related to causal phylogenetic comparative methods paper

causaltrees

R package for exploiting causal structure of phylogenetic trees

cjs_webr

webr coding demonstration about CJS HMM models

contextr

Lightweight R package for making contextual analysis easier

cv

Dynamically generated CV using Rmarkdown (and vitae package)

d3network

Tools for creating D3 JavaScript network graphs from R.

dagnn

Minimal R package for creating custom neural network architectures easily using {torch}

dartr

Importing and Analysing DArT type snp and silicodart data

datasciencecoursera

Repo for Coursera Data Science coursework

datasharing

The Leek group guide to data sharing

ddll

Dinnage Deep Learning Library (personal library of DL related functions)

deebb3d

Code for analysing 3d bird beak shape using deep learning (Deep Bird Beaks 3d)

deepbills

Project to analyse 3d bird bill morphology using deep learning

deepmorph

Code to analyse bird bill morphology using deep generative model (deepSDF).

deepsdf_in_r

My implementation(s) of deepSDF, done all in R

deepshaper

Code for deep generative models of shapes in R.

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Russell Dinnage's Projects

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