raacampbell / sigstar Goto Github PK

Since I have two graphs and hence two y-values corresponding to one x-value I can't use your function to display two significane lines between two points with the same x-value.
Do you have any advice on how to solve this?

Hi there, your function can so far only add significance labels between two individual points as I understand it. I now want to add significance of several points together compared to one, e.g. in the graph below the last four red points are significant to the first one, but I don't want to draw four individual significance lines as this makes the figure too crowded. Do you have any suggestions on how to solve this?
Thanks and best!
Anne

Address the following issue from the FEX:

Had some issue using with line objects. I replaced findMinY with:

function Y=findMinY_New(x)

oldXLim = get(gca,'XLim');
oldYLim = get(gca,'YLim');

axis tight
set(gca,'xlim',x) %Matlab automatically re-tightens y-axis

yLim = get(gca,'YLim'); %Now have max y value of all elements within range.
Y = max(yLim);

axis normal
set(gca,'XLim',oldXLim,'YLim',oldYLim)

The significance bar only extends between the X values associated with the data as defined in the input arguments. For grouped data, like grouped bar charts and notBoxPlot we have points that extend outside of this range by a certain amount. These are ignored by sigStar. The demo function in 3cbc025 shows this.

• AX as input so that you can choose which axis handle to apply sigstar to.
• Handle Output to cell array. (why?)
• The ability to increase YLim as necessary to make space for the stars/n.s. above the objects.
• Added increased font size to stars/n.s. as per Wei Chen below. (can probably do with new tags)

Hi,

I was wondering how I can simply disable the drawing of the comparison lines when the p-value is not significant? I changed 'n.s.' to ''. I just don't want bars when the p-value is >0.05.

if (p>0.05)
return
end

Something like the above is what I need. I tried to insert this in the makeSignificanceBar() function but it seems that it needs to be inserted before the call to makeSignificanceBar() in the for loop. I did this, but ended up getting an error.

Any suggestions?

Currently, the spacing between comparison lines is 0.05*myRange(ylim). However, when there is comparisons within the same group, a value in that group may have a standard deviation bar that's high and this can sometimes overlap with the p-value comparison lines.

An example of what I mean by this is shown here: https://imgur.com/KmDEaca

Example in doc text of function.