Concourse system for automating QIIME 2 development tasks, including continuous integration and continuous deployment (CI/CD).
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License: BSD 3-Clause "New" or "Revised" License
Concourse system for automating QIIME 2 development tasks, including continuous integration and continuous deployment (CI/CD).
Improvement Description
https://github.com/qiime2/busywork/tree/master/extra/github handles updating and maintaining things like issue labels and GH-specific repo templates. It would be great to extend this functionality to also allow for ad-hoc running of the q2lint functionality proposed in qiime2/q2lint#23, which would basically let us run a push-button task to update the copyright year across all QIIME 2 repos.
References
@gregcaporaso's old dev machine
Move private ci-playbooks repo to this repo, split out secrets
Improvement Description
q2cwl should be built by busywork.
Bug Description
The current version of docker available on the Ubuntu 14.04 LTS channel seems to leak inodes, which is the cause of the out of space errors.
Just running most of the test group on a distribution pipeline causes 70% inode utilization. Even small inode leaks will eventually crash this.
Steps to reproduce the behavior
Computation Environment
Comments
Improvement Description
Wire up q2-shogun to GH templates Pipeline
Improvement Description
Wire up q2-fragment-insertion to GH templates Pipeline
New concourse versions will not support:
params:
- example: 1
- other: 2
They should be:
params:
example: 1
other: 2
Most of our pipelines look like that, so we'll need to update. There isn't anything meaningfully different, it is just no longer supported.
Is the main
label not being updated correctly? e.g. https://anaconda.org/qiime2/qiime2/labels
Proposed Behavior
We might need to split up the integration
step so that we can build dev docs and user docs in parallel (or some variation of that idea).
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