Comments (2)
Hi @fangbohao, you can skip the partitioning, it is not a mandatory step. We recommend creating subsets of contigs, when possible and if it makes sense for the specific analysis, to reduce the computational work for PGGB.
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Thanks for your comments, Andrea!
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Related Issues (20)
- Parameters optimization
- [help] My reference genome of a diploid organism is a primary assembly HOT 3
- Gradual increase of pan-genomes HOT 1
- computational efficiency of pggb HOT 3
- container creation failed
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- Setting the poa-length-target(s)
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- run without errors and outputs HOT 7
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