pangenome / hprcyear1v2genbank Goto Github PK
View Code? Open in Web Editor NEWbuilding a human pangenome from the HPRCy1v2 genbank accessioned assemblies
building a human pangenome from the HPRCy1v2 genbank accessioned assemblies
there is extra code in L6 and L8 which leads to errors. see image below (chm13 and grch38 should be removed)
example error:
[W::fai_get_val] Reference chm13 not found in FASTA file, returning empty sequence
[W::fai_get_val] Reference chm13 not found in FASTA file, returning empty sequence
[faidx] Failed to fetch sequence in chm13
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