Comments (3)
HalfPhoton
commented on June 24, 2024
Hi @callumparr ,
Was system are you running on? It seems from your next issue that you were able to install pod5 eventually is that correct?
Kind regards,
Rich
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callumparr
commented on June 24, 2024
Hey, I tried originally in my base conda environment that runs Python 3.6.10.
I then activated another environment I used to install xpore and Python 3.8 and I could use pip install to get pod5 working.
I guess just the original error messaging from conda wasn't helpful.
from pod5-file-format.
callumparr
commented on June 24, 2024
Thankyou
from pod5-file-format.
Related Issues (20)
- pod5 filter/ subset failed with TypeError: enable_string_cache() missing 1 required positional argument: 'enable' HOT 3
- V0.3.6 pod5 view "Error while processing" HOT 3
- pod5 view does not work for some data since version 0.3.0 HOT 6
- pod5 webserver memory error HOT 2
- option to split pod5 by size/read number HOT 3
- Scratch/tmp pod5 problem HOT 21
- Semaphore hissy fit at the end of subset run HOT 1
- pod5 subset/filter in preparation for dorado duplex is slow HOT 5
- error with pod5 convert to_fast5 HOT 1
- Cannot install pod5 through pip on ARM due to dependency issues HOT 11
- Reader class attributes immutable (Cannot edit "sample_id" field of mutable read object) HOT 1
- getrandom error with pod5 convert fast5 HOT 14
- MantaControl': Unable to read fast5 file at /path/: HDF5 exception", HOT 2
- Getting the signal chunk size of a pod5 file HOT 1
- Missing conda pod5 package HOT 2
- No documentation regarding multi-file pod5 dependency HOT 2
- pod5 convert fast5 warning: Failed to read key read_XXX HOT 2
- Troubleshooting Conversion of Fast5 Files to Pod5 Format HOT 12
- error：XX.fast5 is not a multi-read fast5 file HOT 2
- pod5 filter get killed HOT 5
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